Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.08□□□□□ -1.76
SSR1P43307 HMGB1P26-201ENST00000452520 628 ntBASIC4.08□□□□□ -1.76
SSR1P43307 MTCO3P16-201ENST00000454456 754 ntBASIC4.08□□□□□ -1.76
SSR1P43307 DNAJC19P1-201ENST00000455312 319 ntBASIC4.08□□□□□ -1.76
SSR1P43307 RN7SL93P-201ENST00000463035 293 ntBASIC4.08□□□□□ -1.76
SSR1P43307 AC010307.1-201ENST00000467206 836 ntBASIC4.08□□□□□ -1.76
SSR1P43307 RPL7P19-201ENST00000469948 618 ntBASIC4.08□□□□□ -1.76
SSR1P43307 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.08□□□□□ -1.76
SSR1P43307 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSR1P43307 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.08□□□□□ -1.76
SSR1P43307 SUMO1P1-201ENST00000497904 306 ntBASIC4.08□□□□□ -1.76
SSR1P43307 AC004069.2-201ENST00000505438 1114 ntBASIC4.08□□□□□ -1.76
SSR1P43307 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSR1P43307 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.08□□□□□ -1.76
SSR1P43307 AC008011.1-201ENST00000545989 227 ntBASIC4.08□□□□□ -1.76
SSR1P43307 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.08□□□□□ -1.76
SSR1P43307 AC025884.1-201ENST00000556034 378 ntBASIC4.08□□□□□ -1.76
SSR1P43307 AC067805.1-201ENST00000559344 470 ntBASIC4.08□□□□□ -1.76
SSR1P43307 AC012414.2-201ENST00000559474 187 ntBASIC4.08□□□□□ -1.76
SSR1P43307 AC120057.2-201ENST00000571520 271 ntBASIC4.08□□□□□ -1.76
SSR1P43307 MIR4700-201ENST00000578311 74 ntBASIC4.08□□□□□ -1.76
SSR1P43307 MIR4474-201ENST00000579189 78 ntBASIC4.08□□□□□ -1.76
SSR1P43307 EIF1P6-201ENST00000600054 334 ntBASIC4.08□□□□□ -1.76
SSR1P43307 MIR6748-201ENST00000610433 71 ntBASIC4.08□□□□□ -1.76
SSR1P43307 MIR6867-201ENST00000610636 67 ntBASIC4.08□□□□□ -1.76
SSR1P43307 AC016911.1-201ENST00000613297 452 ntBASIC4.08□□□□□ -1.76
SSR1P43307 MIR6716-201ENST00000613413 80 ntBASIC4.08□□□□□ -1.76
SSR1P43307 AC011472.4-201ENST00000615848 491 ntBASIC4.08□□□□□ -1.76
SSR1P43307 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SSR1P43307 CR392039.4-201ENST00000624968 501 ntBASIC4.08□□□□□ -1.76
SSR1P43307 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SSR1P43307 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSR1P43307 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.08□□□□□ -1.76
SSR1P43307 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSR1P43307 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.07□□□□□ -1.76
SSR1P43307 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSR1P43307 MTND4P34-201ENST00000572715 1371 ntBASIC4.07□□□□□ -1.76
SSR1P43307 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSR1P43307 AC126755.2-208ENST00000327792 462 ntBASIC4.07□□□□□ -1.76
SSR1P43307 AC138969.1-213ENST00000331436 462 ntBASIC4.07□□□□□ -1.76
SSR1P43307 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SSR1P43307 RNU6-317P-201ENST00000384031 107 ntBASIC4.07□□□□□ -1.76
SSR1P43307 SNORA70C-201ENST00000384538 135 ntBASIC4.07□□□□□ -1.76
SSR1P43307 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
SSR1P43307 RNA5SP498-201ENST00000411342 120 ntBASIC4.07□□□□□ -1.76
SSR1P43307 Z97055.1-201ENST00000419730 712 ntBASIC4.07□□□□□ -1.76
SSR1P43307 AL031663.1-201ENST00000437445 219 ntBASIC4.07□□□□□ -1.76
SSR1P43307 HIGD1AP11-201ENST00000438361 280 ntBASIC4.07□□□□□ -1.76
SSR1P43307 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSR1P43307 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.07□□□□□ -1.76
SSR1P43307 RPL7P59-201ENST00000447700 943 ntBASIC4.07□□□□□ -1.76
SSR1P43307 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.07□□□□□ -1.76
SSR1P43307 MTCO3P20-201ENST00000454926 688 ntBASIC4.07□□□□□ -1.76
SSR1P43307 HMGN2P16-201ENST00000456802 261 ntBASIC4.07□□□□□ -1.76
SSR1P43307 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.07□□□□□ -1.76
SSR1P43307 RPS3AP6-201ENST00000484430 795 ntBASIC4.07□□□□□ -1.76
SSR1P43307 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.07□□□□□ -1.76
SSR1P43307 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.07□□□□□ -1.76
SSR1P43307 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSR1P43307 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.07□□□□□ -1.76
SSR1P43307 AC026784.1-201ENST00000507986 352 ntBASIC4.07□□□□□ -1.76
SSR1P43307 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSR1P43307 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.07□□□□□ -1.76
SSR1P43307 RNU6-760P-201ENST00000516078 97 ntBASIC4.07□□□□□ -1.76
SSR1P43307 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.07□□□□□ -1.76
SSR1P43307 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.07□□□□□ -1.76
SSR1P43307 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.07□□□□□ -1.76
SSR1P43307 OR4H12P-201ENST00000556269 907 ntBASIC4.07□□□□□ -1.76
SSR1P43307 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.07□□□□□ -1.76
SSR1P43307 MIR3690-201ENST00000580266 75 ntBASIC4.07□□□□□ -1.76
SSR1P43307 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.07□□□□□ -1.76
SSR1P43307 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.07□□□□□ -1.76
SSR1P43307 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.07□□□□□ -1.76
SSR1P43307 AL591034.3-201ENST00000605511 685 ntBASIC4.07□□□□□ -1.76
SSR1P43307 AL451074.6-201ENST00000608512 729 ntBASIC4.07□□□□□ -1.76
SSR1P43307 BX323046.1-201ENST00000610145 535 ntBASIC4.07□□□□□ -1.76
SSR1P43307 AC073530.2-201ENST00000623987 261 ntBASIC4.07□□□□□ -1.76
SSR1P43307 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SSR1P43307 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.07□□□□□ -1.76
SSR1P43307 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SSR1P43307 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSR1P43307 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.07□□□□□ -1.76
SSR1P43307 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSR1P43307 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSR1P43307 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.06□□□□□ -1.76
SSR1P43307 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSR1P43307 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.06□□□□□ -1.76
SSR1P43307 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSR1P43307 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SSR1P43307 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.06□□□□□ -1.76
SSR1P43307 RNU1-18P-201ENST00000363062 164 ntBASIC4.06□□□□□ -1.76
SSR1P43307 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.06□□□□□ -1.76
SSR1P43307 AL049693.1-201ENST00000402760 611 ntBASIC4.06□□□□□ -1.76
SSR1P43307 OR8G2P-201ENST00000412796 908 ntBASIC4.06□□□□□ -1.76
SSR1P43307 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.06□□□□□ -1.76
SSR1P43307 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.06□□□□□ -1.76
SSR1P43307 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSR1P43307 DPPA2P1-201ENST00000428060 556 ntBASIC4.06□□□□□ -1.76
SSR1P43307 C4BPAP2-201ENST00000428434 478 ntBASIC4.06□□□□□ -1.76
SSR1P43307 RPL21P112-201ENST00000434403 463 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms