Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.14□□□□□ -1.59
CLIP1P30622 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CLIP1P30622 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.14□□□□□ -1.59
CLIP1P30622 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP1P30622 RANP4-201ENST00000413361 655 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.14□□□□□ -1.59
CLIP1P30622 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP1P30622 AL451007.1-201ENST00000595491 289 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP1P30622 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP1P30622 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP1P30622 Y_RNA.500-201ENST00000384466 111 ntBASIC5.13□□□□□ -1.59
CLIP1P30622 RFPL4AP5-201ENST00000514977 504 ntBASIC5.13□□□□□ -1.59
CLIP1P30622 KCTD9P6-201ENST00000522306 950 ntBASIC5.13□□□□□ -1.59
CLIP1P30622 TGIF1P1-201ENST00000558095 802 ntBASIC5.13□□□□□ -1.59
CLIP1P30622 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.13□□□□□ -1.59
CLIP1P30622 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC5.13□□□□□ -1.59
CLIP1P30622 AC093732.2-201ENST00000607950 274 ntBASIC5.13□□□□□ -1.59
CLIP1P30622 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.13□□□□□ -1.59
CLIP1P30622 RMST_8.1-201ENST00000610287 165 ntBASIC5.13□□□□□ -1.59
CLIP1P30622 uc_338.1-201ENST00000612113 180 ntBASIC5.13□□□□□ -1.59
CLIP1P30622 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP1P30622 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP1P30622 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CLIP1P30622 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP1P30622 ZNF807-201ENST00000328088 1707 ntBASIC5.12□□□□□ -1.59
CLIP1P30622 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP1P30622 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP1P30622 AL121877.1-201ENST00000453704 622 ntBASIC5.12□□□□□ -1.59
CLIP1P30622 AC096576.1-201ENST00000489014 359 ntBASIC5.12□□□□□ -1.59
CLIP1P30622 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP1P30622 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP1P30622 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.12□□□□□ -1.59
CLIP1P30622 AC138932.5-201ENST00000617759 563 ntBASIC5.12□□□□□ -1.59
CLIP1P30622 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP1P30622 AC093719.1-202ENST00000392735 373 ntBASIC5.11□□□□□ -1.59
CLIP1P30622 RNA5SP31-201ENST00000411144 127 ntBASIC5.11□□□□□ -1.59
CLIP1P30622 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP1P30622 AC017078.1-201ENST00000416146 368 ntBASIC5.11□□□□□ -1.59
CLIP1P30622 RNF19BPX-201ENST00000426224 625 ntBASIC5.11□□□□□ -1.59
CLIP1P30622 BX890604.2-201ENST00000427883 474 ntBASIC5.11□□□□□ -1.59
CLIP1P30622 AC069540.1-201ENST00000446320 988 ntBASIC5.11□□□□□ -1.59
CLIP1P30622 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.11□□□□□ -1.59
CLIP1P30622 AC021146.1-201ENST00000511202 716 ntBASIC5.11□□□□□ -1.59
CLIP1P30622 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.11□□□□□ -1.59
CLIP1P30622 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP1P30622 AC005242.1-201ENST00000585658 438 ntBASIC5.11□□□□□ -1.59
CLIP1P30622 AC015911.5-201ENST00000587076 451 ntBASIC5.11□□□□□ -1.59
CLIP1P30622 AC073869.7-201ENST00000640874 297 ntBASIC5.11□□□□□ -1.59
CLIP1P30622 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP1P30622 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP1P30622 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP1P30622 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.1□□□□□ -1.59
CLIP1P30622 HSPA8P1-201ENST00000425843 1833 ntBASIC5.1□□□□□ -1.59
CLIP1P30622 MIR422A-201ENST00000362286 90 ntBASIC5.1□□□□□ -1.59
CLIP1P30622 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP1P30622 AC087312.1-201ENST00000471411 480 ntBASIC5.1□□□□□ -1.59
CLIP1P30622 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP1P30622 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.1□□□□□ -1.59
CLIP1P30622 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.1□□□□□ -1.59
CLIP1P30622 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP1P30622 SNORA44-201ENST00000384584 132 ntBASIC5.09□□□□□ -1.59
CLIP1P30622 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.09□□□□□ -1.59
CLIP1P30622 GLRXP1-201ENST00000423261 334 ntBASIC5.09□□□□□ -1.59
CLIP1P30622 RPS26P40-201ENST00000435209 294 ntBASIC5.09□□□□□ -1.59
CLIP1P30622 Z99127.3-201ENST00000448158 395 ntBASIC5.09□□□□□ -1.59
CLIP1P30622 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.09□□□□□ -1.59
CLIP1P30622 AC113192.3-201ENST00000529152 742 ntBASIC5.09□□□□□ -1.59
CLIP1P30622 AC011602.1-201ENST00000546484 331 ntBASIC5.09□□□□□ -1.59
CLIP1P30622 AL121603.1-201ENST00000553815 142 ntBASIC5.09□□□□□ -1.59
CLIP1P30622 AL451049.1-201ENST00000608672 497 ntBASIC5.09□□□□□ -1.59
CLIP1P30622 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLIP1P30622 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLIP1P30622 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP1P30622 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP1P30622 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP1P30622 AL138885.1-201ENST00000405921 675 ntBASIC5.08□□□□□ -1.6
CLIP1P30622 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP1P30622 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.08□□□□□ -1.6
CLIP1P30622 AC107083.1-201ENST00000439643 279 ntBASIC5.08□□□□□ -1.6
CLIP1P30622 ELOCP23-201ENST00000452014 332 ntBASIC5.08□□□□□ -1.6
CLIP1P30622 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP1P30622 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP1P30622 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP1P30622 AL139174.1-201ENST00000531489 886 ntBASIC5.08□□□□□ -1.6
CLIP1P30622 AC087888.1-201ENST00000550884 1254 ntBASIC5.08□□□□□ -1.6
CLIP1P30622 AC006504.3-201ENST00000586818 523 ntBASIC5.08□□□□□ -1.6
CLIP1P30622 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP1P30622 AC018692.3-201ENST00000623929 123 ntBASIC5.08□□□□□ -1.6
CLIP1P30622 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP1P30622 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP1P30622 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP1P30622 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.07□□□□□ -1.6
CLIP1P30622 COTL1P1-201ENST00000422309 375 ntBASIC5.07□□□□□ -1.6
CLIP1P30622 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.07□□□□□ -1.6
CLIP1P30622 RPL23AP94-201ENST00000512518 302 ntBASIC5.07□□□□□ -1.6
CLIP1P30622 AP001636.2-201ENST00000525517 696 ntBASIC5.07□□□□□ -1.6
CLIP1P30622 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.07□□□□□ -1.6
CLIP1P30622 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.07□□□□□ -1.6
CLIP1P30622 MIR4425-201ENST00000580572 84 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms