Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
HOXD10P28358 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.34□□□□□ -1.72
HOXD10P28358 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.34□□□□□ -1.72
HOXD10P28358 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXD10P28358 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD10P28358 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD10P28358 AL672167.1-203ENST00000641299 2975 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HOXD10P28358 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXD10P28358 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD10P28358 MIR199A2-201ENST00000385289 110 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 SNORD96B-201ENST00000386148 79 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD10P28358 AL138878.1-201ENST00000405131 347 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 RN7SKP167-201ENST00000411047 285 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD10P28358 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXD10P28358 AL159169.1-201ENST00000421119 127 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD10P28358 NANOGP6-201ENST00000429190 847 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 MTCYBP29-201ENST00000436327 1006 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 Z74696.2-201ENST00000436514 498 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD10P28358 RNU7-170P-201ENST00000459303 61 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 RPL21P10-201ENST00000463521 490 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXD10P28358 AC023141.12-201ENST00000512399 199 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD10P28358 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXD10P28358 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD10P28358 AC011611.1-201ENST00000552179 197 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXD10P28358 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD10P28358 RNU1-30P-201ENST00000606575 163 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 AL355816.1-201ENST00000607951 118 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 MIR8058-201ENST00000615737 89 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 AL355365.1-201ENST00000616480 294 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 AL133370.2-201ENST00000619934 439 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 MIR4727-201ENST00000622232 55 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 AP003072.4-201ENST00000624580 310 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 AC138649.5-201ENST00000637456 137 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXD10P28358 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD10P28358 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD10P28358 ZNF962P-201ENST00000443465 3140 ntBASIC4.33□□□□□ -1.72
HOXD10P28358 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD10P28358 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD10P28358 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXD10P28358 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXD10P28358 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HOXD10P28358 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HOXD10P28358 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD10P28358 ZNF833P-201ENST00000424938 1494 ntBASIC4.32□□□□□ -1.72
HOXD10P28358 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD10P28358 RNA5SP120-201ENST00000410900 112 ntBASIC4.32□□□□□ -1.72
HOXD10P28358 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD10P28358 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD10P28358 RPL23AP62-201ENST00000463396 453 ntBASIC4.32□□□□□ -1.72
HOXD10P28358 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD10P28358 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXD10P28358 RNU2-58P-201ENST00000516403 183 ntBASIC4.32□□□□□ -1.72
HOXD10P28358 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD10P28358 AC092851.1-201ENST00000535964 478 ntBASIC4.32□□□□□ -1.72
HOXD10P28358 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD10P28358 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD10P28358 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXD10P28358 BX322635.1-201ENST00000605804 496 ntBASIC4.32□□□□□ -1.72
HOXD10P28358 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD10P28358 MIR7851-201ENST00000610611 160 ntBASIC4.32□□□□□ -1.72
HOXD10P28358 AC064801.1-201ENST00000612025 407 ntBASIC4.32□□□□□ -1.72
HOXD10P28358 AC116563.2-201ENST00000624751 535 ntBASIC4.32□□□□□ -1.72
HOXD10P28358 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD10P28358 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXD10P28358 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
HOXD10P28358 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HOXD10P28358 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HOXD10P28358 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD10P28358 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD10P28358 AC027287.1-201ENST00000553115 1453 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD10P28358 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD10P28358 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD10P28358 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD10P28358 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD10P28358 RNU6-1251P-201ENST00000364502 107 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 MIR490-201ENST00000384865 128 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 U3.19-201ENST00000390893 196 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD10P28358 AC013404.1-201ENST00000413068 249 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD10P28358 CYCSP4-201ENST00000429682 331 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 HMGB1P37-201ENST00000439613 609 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD10P28358 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXD10P28358 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD10P28358 MTCO1P30-201ENST00000515244 580 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 AC090136.1-201ENST00000520009 240 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD10P28358 AC007458.1-201ENST00000542812 373 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 AC067805.1-201ENST00000559344 470 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms