Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH3P22223 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CDH3P22223 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH3P22223 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH3P22223 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH3P22223 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CDH3P22223 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CDH3P22223 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH3P22223 AC105074.1-201ENST00000623380 3095 ntBASIC4.17□□□□□ -1.74
CDH3P22223 RNU1-132P-201ENST00000364300 164 ntBASIC4.17□□□□□ -1.74
CDH3P22223 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CDH3P22223 AC097374.1-203ENST00000400783 485 ntBASIC4.17□□□□□ -1.74
CDH3P22223 SNORA74C-2-201ENST00000411179 201 ntBASIC4.17□□□□□ -1.74
CDH3P22223 RPS7P9-201ENST00000414704 586 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AL449283.1-202ENST00000418249 604 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH3P22223 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH3P22223 AC027644.1-201ENST00000419595 298 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH3P22223 EIF1P3-201ENST00000423841 334 ntBASIC4.17□□□□□ -1.74
CDH3P22223 MTCO2P17-201ENST00000424336 677 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC073335.1-201ENST00000427776 363 ntBASIC4.17□□□□□ -1.74
CDH3P22223 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH3P22223 AC092809.1-201ENST00000441469 474 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC009963.2-201ENST00000453431 138 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH3P22223 RPL35P6-201ENST00000490024 372 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC091167.1-201ENST00000492017 396 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH3P22223 AC091860.1-201ENST00000505723 432 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC108475.1-201ENST00000507880 950 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC113420.1-201ENST00000507903 571 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC008837.1-201ENST00000511513 412 ntBASIC4.17□□□□□ -1.74
CDH3P22223 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH3P22223 MRPL49P2-201ENST00000521066 465 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH3P22223 OR7E13P-201ENST00000526052 910 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH3P22223 AC139103.1-201ENST00000534696 1030 ntBASIC4.17□□□□□ -1.74
CDH3P22223 TRAV8-5-201ENST00000537369 341 ntBASIC4.17□□□□□ -1.74
CDH3P22223 CYP2C60P-201ENST00000566088 139 ntBASIC4.17□□□□□ -1.74
CDH3P22223 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH3P22223 AC112220.2-201ENST00000605513 533 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AL365400.2-201ENST00000605604 902 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AP003117.2-201ENST00000606010 545 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AL078595.3-201ENST00000623815 1166 ntBASIC4.17□□□□□ -1.74
CDH3P22223 AC092608.3-201ENST00000625017 386 ntBASIC4.17□□□□□ -1.74
CDH3P22223 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH3P22223 MIR3653-201ENST00000625572 110 ntBASIC4.17□□□□□ -1.74
CDH3P22223 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH3P22223 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
CDH3P22223 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CDH3P22223 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.17□□□□□ -1.74
CDH3P22223 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH3P22223 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH3P22223 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH3P22223 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH3P22223 AL353743.4-201ENST00000422653 1547 ntBASIC4.16□□□□□ -1.74
CDH3P22223 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH3P22223 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CDH3P22223 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDH3P22223 ZNF29P-201ENST00000225587 168 ntBASIC4.16□□□□□ -1.74
CDH3P22223 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH3P22223 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH3P22223 RNU6-549P-201ENST00000384433 107 ntBASIC4.16□□□□□ -1.74
CDH3P22223 MIR1183-201ENST00000408856 89 ntBASIC4.16□□□□□ -1.74
CDH3P22223 RNU6-77P-201ENST00000410554 91 ntBASIC4.16□□□□□ -1.74
CDH3P22223 NRBF2P2-201ENST00000413087 861 ntBASIC4.16□□□□□ -1.74
CDH3P22223 MFSD13B-201ENST00000420133 1290 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AC092647.1-201ENST00000420654 287 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH3P22223 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH3P22223 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH3P22223 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH3P22223 AL031736.2-201ENST00000426573 787 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH3P22223 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH3P22223 AC002542.1-201ENST00000440683 193 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AL512326.1-201ENST00000443050 721 ntBASIC4.16□□□□□ -1.74
CDH3P22223 RPL21P133-201ENST00000443666 476 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AL592437.1-201ENST00000443781 492 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AL031313.1-201ENST00000448435 256 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH3P22223 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH3P22223 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH3P22223 AP000873.1-201ENST00000463987 400 ntBASIC4.16□□□□□ -1.74
CDH3P22223 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH3P22223 AC041039.1-201ENST00000485656 536 ntBASIC4.16□□□□□ -1.74
CDH3P22223 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH3P22223 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH3P22223 IGJP1-201ENST00000522682 475 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH3P22223 AC124293.1-201ENST00000530034 493 ntBASIC4.16□□□□□ -1.74
CDH3P22223 CYCSP29-201ENST00000533731 318 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH3P22223 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH3P22223 NTAN1P1-201ENST00000603150 646 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AL354984.3-201ENST00000604803 325 ntBASIC4.16□□□□□ -1.74
CDH3P22223 AC010201.1-201ENST00000605051 540 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms