Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.09□□□□□ -1.59
CNOT4O95628 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.09□□□□□ -1.59
CNOT4O95628 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CNOT4O95628 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.09□□□□□ -1.6
CNOT4O95628 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CNOT4O95628 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CNOT4O95628 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CNOT4O95628 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.08□□□□□ -1.6
CNOT4O95628 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CNOT4O95628 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CNOT4O95628 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.08□□□□□ -1.6
CNOT4O95628 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CNOT4O95628 AL139128.1-201ENST00000413921 941 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 NIPA2P1-201ENST00000426223 976 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC127526.2-201ENST00000426436 775 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 CRIP1P1-201ENST00000427567 185 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.08□□□□□ -1.6
CNOT4O95628 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.08□□□□□ -1.6
CNOT4O95628 AL358934.1-201ENST00000432346 324 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC104850.1-201ENST00000435940 476 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.08□□□□□ -1.6
CNOT4O95628 PGBD4P3-201ENST00000440731 581 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.08□□□□□ -1.6
CNOT4O95628 OR7E116P-201ENST00000448529 957 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.08□□□□□ -1.6
CNOT4O95628 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.08□□□□□ -1.6
CNOT4O95628 MEMO1P4-201ENST00000453590 386 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 BX322784.1-201ENST00000455793 1077 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 RPS23P2-201ENST00000463671 415 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 ACTR3P3-201ENST00000480448 893 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 AC090638.1-201ENST00000498296 909 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.08□□□□□ -1.6
CNOT4O95628 AC018710.1-201ENST00000506509 158 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC022447.3-201ENST00000506865 495 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.08□□□□□ -1.6
CNOT4O95628 RNU6-488P-201ENST00000515918 99 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 RNU6-615P-201ENST00000516065 106 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 Y_RNA.704-201ENST00000516851 102 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 RNA5SP34-201ENST00000516887 130 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 NRBF2P4-201ENST00000520874 850 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 HIGD1AP6-201ENST00000521833 279 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.08□□□□□ -1.6
CNOT4O95628 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.08□□□□□ -1.6
CNOT4O95628 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.08□□□□□ -1.6
CNOT4O95628 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.08□□□□□ -1.6
CNOT4O95628 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.08□□□□□ -1.6
CNOT4O95628 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.08□□□□□ -1.6
CNOT4O95628 NPM1P42-201ENST00000560329 862 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC009852.2-201ENST00000567898 485 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.08□□□□□ -1.6
CNOT4O95628 MIR4505-201ENST00000582238 73 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.08□□□□□ -1.6
CNOT4O95628 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.08□□□□□ -1.6
CNOT4O95628 AC009977.1-201ENST00000586015 570 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 SUGT1P3-202ENST00000604259 383 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC007363.1-201ENST00000604736 620 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC019193.2-201ENST00000610012 634 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC008115.3-201ENST00000614874 549 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC000123.2-201ENST00000623124 461 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 FRG1KP-201ENST00000623592 341 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC000095.2-202ENST00000637415 154 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 MIR1321-201ENST00000637766 79 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.08□□□□□ -1.6
CNOT4O95628 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNOT4O95628 SAGE2P-201ENST00000420011 2126 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CNOT4O95628 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.08□□□□□ -1.6
CNOT4O95628 AC025470.1-201ENST00000510053 2032 ntBASIC5.07□□□□□ -1.6
CNOT4O95628 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.07□□□□□ -1.6
CNOT4O95628 AC074029.4-201ENST00000624796 1859 ntBASIC5.07□□□□□ -1.6
CNOT4O95628 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CNOT4O95628 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.07□□□□□ -1.6
CNOT4O95628 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CNOT4O95628 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNOT4O95628 AC004158.1-201ENST00000564508 4319 ntBASIC5.07□□□□□ -1.6
CNOT4O95628 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CNOT4O95628 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.07□□□□□ -1.6
CNOT4O95628 RNU1-19P-201ENST00000363306 165 ntBASIC5.07□□□□□ -1.6
CNOT4O95628 RNU6-1151P-201ENST00000384684 107 ntBASIC5.07□□□□□ -1.6
CNOT4O95628 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CNOT4O95628 RPL31P1-201ENST00000398116 372 ntBASIC5.07□□□□□ -1.6
CNOT4O95628 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.07□□□□□ -1.6
CNOT4O95628 AL136133.1-201ENST00000413694 376 ntBASIC5.07□□□□□ -1.6
CNOT4O95628 RNF10P1-201ENST00000418589 369 ntBASIC5.07□□□□□ -1.6
CNOT4O95628 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.07□□□□□ -1.6
CNOT4O95628 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.07□□□□□ -1.6
CNOT4O95628 BX890604.2-201ENST00000427883 474 ntBASIC5.07□□□□□ -1.6
CNOT4O95628 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms