Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.02□□□□□ -1.77
MSH4O15457 CABYRP1-201ENST00000465493 1045 ntBASIC4.02□□□□□ -1.77
MSH4O15457 AC034236.1-201ENST00000469891 373 ntBASIC4.02□□□□□ -1.77
MSH4O15457 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH4O15457 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH4O15457 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH4O15457 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH4O15457 AC068446.3-201ENST00000555285 382 ntBASIC4.02□□□□□ -1.77
MSH4O15457 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH4O15457 AC053481.3-201ENST00000577881 843 ntBASIC4.02□□□□□ -1.77
MSH4O15457 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.02□□□□□ -1.77
MSH4O15457 AC243654.2-201ENST00000612843 443 ntBASIC4.02□□□□□ -1.77
MSH4O15457 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MSH4O15457 U4.6-201ENST00000621618 127 ntBASIC4.02□□□□□ -1.77
MSH4O15457 AL357559.1-201ENST00000622228 274 ntBASIC4.02□□□□□ -1.77
MSH4O15457 AC243312.2-201ENST00000623340 601 ntBASIC4.02□□□□□ -1.77
MSH4O15457 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MSH4O15457 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH4O15457 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MSH4O15457 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
MSH4O15457 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
MSH4O15457 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.02□□□□□ -1.77
MSH4O15457 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
MSH4O15457 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MSH4O15457 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MSH4O15457 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH4O15457 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.01□□□□□ -1.77
MSH4O15457 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MSH4O15457 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MSH4O15457 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MSH4O15457 RNU6-283P-201ENST00000364788 107 ntBASIC4.01□□□□□ -1.77
MSH4O15457 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
MSH4O15457 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MSH4O15457 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
MSH4O15457 RNU6-317P-201ENST00000384031 107 ntBASIC4.01□□□□□ -1.77
MSH4O15457 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
MSH4O15457 AL356057.1-202ENST00000402263 756 ntBASIC4.01□□□□□ -1.77
MSH4O15457 AC093578.1-201ENST00000415219 368 ntBASIC4.01□□□□□ -1.77
MSH4O15457 CRYBB2P1-203ENST00000415709 538 ntBASIC4.01□□□□□ -1.77
MSH4O15457 AC073063.1-201ENST00000434352 607 ntBASIC4.01□□□□□ -1.77
MSH4O15457 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH4O15457 MTCO3P43-201ENST00000440974 771 ntBASIC4.01□□□□□ -1.77
MSH4O15457 BTBD7P2-201ENST00000441962 620 ntBASIC4.01□□□□□ -1.77
MSH4O15457 RPL6P5-201ENST00000445678 828 ntBASIC4.01□□□□□ -1.77
MSH4O15457 AC010307.1-201ENST00000467206 836 ntBASIC4.01□□□□□ -1.77
MSH4O15457 AC084357.1-201ENST00000473404 255 ntBASIC4.01□□□□□ -1.77
MSH4O15457 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH4O15457 NPM1P17-201ENST00000479221 602 ntBASIC4.01□□□□□ -1.77
MSH4O15457 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH4O15457 AC110768.1-201ENST00000509222 400 ntBASIC4.01□□□□□ -1.77
MSH4O15457 SOD1P3-201ENST00000518682 454 ntBASIC4.01□□□□□ -1.77
MSH4O15457 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH4O15457 AC103843.2-201ENST00000530523 682 ntBASIC4.01□□□□□ -1.77
MSH4O15457 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.01□□□□□ -1.77
MSH4O15457 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.01□□□□□ -1.77
MSH4O15457 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH4O15457 AC040174.2-201ENST00000602701 465 ntBASIC4.01□□□□□ -1.77
MSH4O15457 HMGB1P50-201ENST00000605814 607 ntBASIC4.01□□□□□ -1.77
MSH4O15457 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH4O15457 AC107308.1-201ENST00000615897 301 ntBASIC4.01□□□□□ -1.77
MSH4O15457 MIR6075-201ENST00000620782 95 ntBASIC4.01□□□□□ -1.77
MSH4O15457 AC244258.1-201ENST00000637553 1071 ntBASIC4.01□□□□□ -1.77
MSH4O15457 AL392088.2-201ENST00000637607 285 ntBASIC4.01□□□□□ -1.77
MSH4O15457 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
MSH4O15457 OR6C71P-202ENST00000641886 1107 ntBASIC4.01□□□□□ -1.77
MSH4O15457 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH4O15457 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.01□□□□□ -1.77
MSH4O15457 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
MSH4O15457 AC106871.1-201ENST00000568324 3102 ntBASIC4.01□□□□□ -1.77
MSH4O15457 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4□□□□□ -1.77
MSH4O15457 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4□□□□□ -1.77
MSH4O15457 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
MSH4O15457 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
MSH4O15457 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4□□□□□ -1.77
MSH4O15457 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4□□□□□ -1.77
MSH4O15457 MIR218-2-201ENST00000385006 110 ntBASIC4□□□□□ -1.77
MSH4O15457 ZNF603P-201ENST00000405613 487 ntBASIC4□□□□□ -1.77
MSH4O15457 U3.39-201ENST00000408569 239 ntBASIC4□□□□□ -1.77
MSH4O15457 RN7SKP56-201ENST00000410513 331 ntBASIC4□□□□□ -1.77
MSH4O15457 MTND4P22-201ENST00000413116 1169 ntBASIC4□□□□□ -1.77
MSH4O15457 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4□□□□□ -1.77
MSH4O15457 FAR1P1-201ENST00000427163 934 ntBASIC4□□□□□ -1.77
MSH4O15457 ATP5JP1-201ENST00000431631 322 ntBASIC4□□□□□ -1.77
MSH4O15457 AC074367.1-201ENST00000438685 1125 ntBASIC4□□□□□ -1.77
MSH4O15457 RBMY2UP-201ENST00000453474 324 ntBASIC4□□□□□ -1.77
MSH4O15457 U3.44-201ENST00000458938 192 ntBASIC4□□□□□ -1.77
MSH4O15457 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4□□□□□ -1.77
MSH4O15457 OR8I1P-201ENST00000529291 931 ntBASIC4□□□□□ -1.77
MSH4O15457 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4□□□□□ -1.77
MSH4O15457 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
MSH4O15457 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4□□□□□ -1.77
MSH4O15457 SNRPGP1-201ENST00000553864 222 ntBASIC4□□□□□ -1.77
MSH4O15457 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4□□□□□ -1.77
MSH4O15457 AC099489.2-201ENST00000574976 260 ntBASIC4□□□□□ -1.77
MSH4O15457 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4□□□□□ -1.77
MSH4O15457 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4□□□□□ -1.77
MSH4O15457 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
MSH4O15457 AC115621.1-201ENST00000604653 858 ntBASIC4□□□□□ -1.77
MSH4O15457 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
MSH4O15457 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms