Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RPL7L1P13-201ENST00000511702 739 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC004980.4-201ENST00000513375 203 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 RNU1-61P-201ENST00000516107 151 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 IGKV3D-34-201ENST00000522638 302 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AP003041.2-201ENST00000525666 1180 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC009117.1-201ENST00000563948 554 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 MIR4266-201ENST00000583300 55 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 RPL12P50-201ENST00000603116 116 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC098935.2-201ENST00000604222 466 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC112230.1-201ENST00000604342 547 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC091167.4-201ENST00000605079 184 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 MIR6776-201ENST00000616678 59 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC002076.2-201ENST00000617362 122 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AP005019.3-201ENST00000620418 560 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC022509.4-201ENST00000621404 572 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 CR392039.4-201ENST00000624968 501 ntBASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LINC01558Q9Y6Z2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AL590240.1-201ENST00000334118 313 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 RNA5SP393-201ENST00000363423 117 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AL645927.1-201ENST00000396783 406 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 EIF5P1-201ENST00000400019 1231 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 BTBD10P2-201ENST00000404779 676 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AL591034.1-201ENST00000407447 340 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 TMSB10P2-201ENST00000416049 131 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 TOMM22P1-201ENST00000418578 312 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 RCC2P2-201ENST00000422174 918 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 CYCSP4-201ENST00000429682 331 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 SLC25A24P1-202ENST00000434803 1220 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC009961.3-201ENST00000449832 765 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 SUN3-208ENST00000453192 801 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 OR2A1-AS1-202ENST00000467944 422 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 RN7SL385P-201ENST00000468873 276 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC022034.3-201ENST00000471393 478 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 RPL35P6-201ENST00000490024 372 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AL132838.2-201ENST00000492041 314 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AP002812.1-201ENST00000495378 474 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 SNRPCP2-201ENST00000504370 475 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 RNA5SP49-201ENST00000516450 115 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 RNU6-1073P-201ENST00000517182 106 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC022826.1-201ENST00000519383 805 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 OR5G4P-201ENST00000525251 760 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 OR7E13P-201ENST00000526052 910 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AP001781.1-201ENST00000530977 207 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 YPEL5P3-201ENST00000547227 352 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 PSMB7P1-201ENST00000556349 514 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AL356575.1-201ENST00000603008 283 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AL049779.4-201ENST00000604500 156 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 MIR6868-201ENST00000611215 58 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms