Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 snoU13.29-201ENST00000459370 104 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 RN7SL610P-201ENST00000463845 291 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 Y_RNA.672-201ENST00000516289 104 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 AC022882.1-201ENST00000532142 501 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 MIR4666A-201ENST00000580160 79 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 AC243773.3-201ENST00000613270 256 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 AL138960.1-201ENST00000613838 513 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 AC018445.2-201ENST00000622987 260 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 AC025574.1-201ENST00000554784 1653 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 AL161756.3-201ENST00000641216 2071 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 AC021242.1-201ENST00000507315 2035 ntBASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PDZRN3Q9UPQ7 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 GAPDHP24-201ENST00000328713 983 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 RNU6-723P-201ENST00000383973 107 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AC068050.1-201ENST00000394891 380 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AL445529.1-201ENST00000398713 389 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 RNU4-34P-201ENST00000410431 124 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AL451054.2-201ENST00000420896 202 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 NME1P1-201ENST00000420914 382 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 RPS15AP30-201ENST00000420976 390 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 FAM96AP1-201ENST00000430879 482 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 NRBF2P3-201ENST00000432731 865 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AL606489.2-201ENST00000433886 234 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 MTND5P15-201ENST00000434246 349 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AC016027.4-201ENST00000450866 277 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 PFN1P6-201ENST00000476786 399 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AC083795.1-201ENST00000491760 320 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 BX510359.5-201ENST00000515651 304 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 RNU6-408P-201ENST00000515910 100 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 NIFKP8-201ENST00000560500 874 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AC018889.1-201ENST00000605372 397 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AC004805.2-201ENST00000605382 482 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 RPL12P48-201ENST00000605620 304 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 uc_338.26-201ENST00000612659 160 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 CASC19-221ENST00000641309 1382 ntBASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
PDZRN3Q9UPQ7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AC005224.3-201ENST00000584683 2140 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 SNORA64.1-201ENST00000362600 132 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 SNORD1C-201ENST00000363315 78 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AL451074.5-201ENST00000415894 435 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 PIGPP3-201ENST00000425307 415 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AC093151.1-201ENST00000427711 313 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AL132765.1-201ENST00000434165 553 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 RPL12P25-201ENST00000455592 494 ntBASIC7.54□□□□□ -1.2
PDZRN3Q9UPQ7 RNU6-261P-201ENST00000459506 102 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms