Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 HMGB3P9-201ENST00000441799 583 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 CCRL1P1-201ENST00000449542 1053 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AC233982.1-201ENST00000451247 436 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 uc_338.25-201ENST00000613756 156 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 SCN1A-220ENST00000641603 12506 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 SAGE4P-201ENST00000442271 3381 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AL445213.1-201ENST00000412589 747 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AC004552.1-201ENST00000419089 348 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AC000041.1-201ENST00000439655 175 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AC090543.2-201ENST00000483963 348 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AC020893.1-201ENST00000502452 580 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 PCBP2P3-201ENST00000509726 843 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 RFPL4AP5-201ENST00000514977 504 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 NARSP2-201ENST00000518524 679 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AC005242.1-201ENST00000585658 438 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AL162713.1-201ENST00000604480 262 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AC093732.2-201ENST00000607950 274 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SCN11AQ9UI33 ZNF807-201ENST00000328088 1707 ntBASIC4.22□□□□□ -1.73
SCN11AQ9UI33 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.21□□□□□ -1.73
SCN11AQ9UI33 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
SCN11AQ9UI33 FAM35DP-201ENST00000323387 2712 ntBASIC4.21□□□□□ -1.74
SCN11AQ9UI33 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 SNORA44-201ENST00000384584 132 ntBASIC4.21□□□□□ -1.74
SCN11AQ9UI33 AL353678.1-201ENST00000422735 741 ntBASIC4.21□□□□□ -1.74
SCN11AQ9UI33 AC093698.1-201ENST00000423843 571 ntBASIC4.21□□□□□ -1.74
SCN11AQ9UI33 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 AL121603.1-201ENST00000553815 142 ntBASIC4.21□□□□□ -1.74
SCN11AQ9UI33 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 AC244205.2-202ENST00000635781 342 ntBASIC4.21□□□□□ -1.74
SCN11AQ9UI33 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN11AQ9UI33 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCN11AQ9UI33 AL645568.2-201ENST00000432815 1337 ntBASIC4.2□□□□□ -1.74
SCN11AQ9UI33 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.2□□□□□ -1.74
SCN11AQ9UI33 SNORD67-201ENST00000390833 111 ntBASIC4.2□□□□□ -1.74
SCN11AQ9UI33 AL160175.1-201ENST00000428124 247 ntBASIC4.2□□□□□ -1.74
SCN11AQ9UI33 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.2□□□□□ -1.74
SCN11AQ9UI33 RPL7P47-201ENST00000497299 556 ntBASIC4.2□□□□□ -1.74
SCN11AQ9UI33 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCN11AQ9UI33 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.2□□□□□ -1.74
SCN11AQ9UI33 CEP170P1-201ENST00000502249 4587 ntBASIC4.2□□□□□ -1.74
SCN11AQ9UI33 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCN11AQ9UI33 AC073325.2-201ENST00000339545 159 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 RNU1-89P-201ENST00000384592 164 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 AC008264.1-201ENST00000447612 367 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 MTCO3P16-201ENST00000454456 754 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 AC068724.1-201ENST00000487100 792 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 KCTD9P6-201ENST00000522306 950 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 CR383656.14-201ENST00000551951 406 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 PROS2P-201ENST00000474651 1951 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 AC002524.1-201ENST00000411687 547 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 AC126124.2-201ENST00000413542 321 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 SEPT7P3-201ENST00000455017 621 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 DNAJC19P1-201ENST00000455312 319 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 AC011825.1-201ENST00000484967 388 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 AC010486.1-201ENST00000511793 424 ntBASIC4.19□□□□□ -1.74
SCN11AQ9UI33 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.19□□□□□ -1.74
SCN11AQ9UI33 PSMA2P1-201ENST00000526365 646 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms