Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC88CQ9P219 MIR4738-201ENST00000579134 87 ntBASIC3.26□□□□□ -1.89
CCDC88CQ9P219 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC88CQ9P219 U7.8-201ENST00000619968 63 ntBASIC3.26□□□□□ -1.89
CCDC88CQ9P219 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 RNVU1-14-201ENST00000384770 164 ntBASIC3.25□□□□□ -1.89
CCDC88CQ9P219 AL589994.1-201ENST00000404962 340 ntBASIC3.25□□□□□ -1.89
CCDC88CQ9P219 NDUFB1P1-201ENST00000435191 180 ntBASIC3.25□□□□□ -1.89
CCDC88CQ9P219 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 AC091862.1-201ENST00000438016 1100 ntBASIC3.25□□□□□ -1.89
CCDC88CQ9P219 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 DSTNP2-201ENST00000504533 515 ntBASIC3.25□□□□□ -1.89
CCDC88CQ9P219 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 AL109741.3-201ENST00000561748 592 ntBASIC3.25□□□□□ -1.89
CCDC88CQ9P219 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 AC135507.2-201ENST00000612443 309 ntBASIC3.25□□□□□ -1.89
CCDC88CQ9P219 HSPA8P19-201ENST00000505359 1517 ntBASIC3.25□□□□□ -1.89
CCDC88CQ9P219 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 AC073346.2-201ENST00000624724 2058 ntBASIC3.25□□□□□ -1.89
CCDC88CQ9P219 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC88CQ9P219 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AC004972.1-201ENST00000623934 2209 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AC013268.2-201ENST00000420753 337 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AL034379.1-201ENST00000423216 253 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 HMGB3P10-201ENST00000434734 572 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AC016687.1-201ENST00000482574 353 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 RNU2-27P-201ENST00000516185 142 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AC109635.6-201ENST00000525487 1113 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 PDCL2P2-201ENST00000533651 189 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 TGIF1P1-201ENST00000558095 802 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AC091953.5-201ENST00000622919 233 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 RNU6-178P-201ENST00000384631 104 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 Z99755.1-201ENST00000414048 380 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 RPL7P38-201ENST00000488396 739 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AC021146.1-201ENST00000511202 716 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AC090819.1-201ENST00000523800 1111 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AL713998.2-201ENST00000604538 1198 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC88CQ9P219 AC105227.2-201ENST00000615075 605 ntBASIC3.24□□□□□ -1.89
CCDC88CQ9P219 MTND5P1-201ENST00000445440 1375 ntBASIC3.23□□□□□ -1.89
CCDC88CQ9P219 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 SNORA48.2-201ENST00000390926 124 ntBASIC3.23□□□□□ -1.89
CCDC88CQ9P219 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 AL357075.1-201ENST00000404107 726 ntBASIC3.23□□□□□ -1.89
CCDC88CQ9P219 RSL24D1P1-201ENST00000404972 493 ntBASIC3.23□□□□□ -1.89
CCDC88CQ9P219 SNORA11.1-201ENST00000408133 129 ntBASIC3.23□□□□□ -1.89
CCDC88CQ9P219 AL671855.1-201ENST00000446875 1203 ntBASIC3.23□□□□□ -1.89
CCDC88CQ9P219 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 snoU13.24-201ENST00000458998 104 ntBASIC3.23□□□□□ -1.89
CCDC88CQ9P219 RPL21P71-201ENST00000465598 459 ntBASIC3.23□□□□□ -1.89
CCDC88CQ9P219 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 AC026333.2-201ENST00000542164 106 ntBASIC3.23□□□□□ -1.89
CCDC88CQ9P219 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC88CQ9P219 AL365440.1-201ENST00000436135 2167 ntBASIC3.23□□□□□ -1.89
CCDC88CQ9P219 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 BX323014.1-201ENST00000412876 237 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 RPS12P23-201ENST00000419579 400 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AP000936.3-201ENST00000438127 255 ntBASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC88CQ9P219 AL133244.1-201ENST00000456007 258 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms