Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC42Q96M95 AL161713.1-201ENST00000555538 145 ntBASIC3.7□□□□□ -1.82
CCDC42Q96M95 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC42Q96M95 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC42Q96M95 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC42Q96M95 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC42Q96M95 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC42Q96M95 AC006116.10-201ENST00000591836 581 ntBASIC3.7□□□□□ -1.82
CCDC42Q96M95 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC42Q96M95 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC42Q96M95 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.7□□□□□ -1.82
CCDC42Q96M95 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC42Q96M95 AC017071.1-201ENST00000564407 2204 ntBASIC3.7□□□□□ -1.82
CCDC42Q96M95 AP001148.1-201ENST00000624124 2359 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC42Q96M95 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC42Q96M95 AC092326.2-201ENST00000624772 1561 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CCDC42Q96M95 AC007066.1-201ENST00000392902 381 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 RSL24D1P1-201ENST00000404972 493 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 RN7SKP222-201ENST00000410651 315 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 ATP5A1P2-201ENST00000412323 255 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC42Q96M95 NPM1P24-201ENST00000428039 894 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 TMED11P-201ENST00000479478 690 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 RPL23AP44-201ENST00000482216 473 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC42Q96M95 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC42Q96M95 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CCDC42Q96M95 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC42Q96M95 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC42Q96M95 AC107982.3-201ENST00000584957 985 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC42Q96M95 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC42Q96M95 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC42Q96M95 XIST_intron.1-201ENST00000619444 68 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC42Q96M95 AL118496.1-201ENST00000440201 1812 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC42Q96M95 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC42Q96M95 SEPT7P7-201ENST00000420492 1301 ntBASIC3.69□□□□□ -1.82
CCDC42Q96M95 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC42Q96M95 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC42Q96M95 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC42Q96M95 U3.15-201ENST00000365398 212 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC42Q96M95 AC068538.1-201ENST00000376856 336 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 SNORD3H-201ENST00000384486 214 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 Z99755.1-201ENST00000414048 380 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 SMC4P1-201ENST00000414479 527 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 TRGV6-201ENST00000417928 299 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC42Q96M95 AC245291.1-201ENST00000419501 328 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 MTCYBP7-201ENST00000419540 1134 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 C4BPAP2-201ENST00000428434 478 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 SNORA64.4-201ENST00000516632 81 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 AC007224.1-201ENST00000564410 144 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 AC007448.1-201ENST00000582714 234 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 AC067852.3-201ENST00000589177 561 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 AC010591.1-201ENST00000603941 649 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 AC083809.1-201ENST00000615051 472 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 MIR8058-201ENST00000615737 89 ntBASIC3.68□□□□□ -1.82
CCDC42Q96M95 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC42Q96M95 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC42Q96M95 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC42Q96M95 AC006042.3-201ENST00000454684 1469 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC42Q96M95 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC42Q96M95 U8.11-201ENST00000384699 133 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 U8.12-201ENST00000384701 133 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 RPL30P3-201ENST00000424262 333 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 AC009965.2-201ENST00000425328 970 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 RSL24D1P6-201ENST00000426934 401 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 RPL7P2-201ENST00000427639 268 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 RRM2P4-201ENST00000441721 562 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 AC009220.1-201ENST00000451614 275 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 U3.44-201ENST00000458938 192 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 U8.18-201ENST00000459285 133 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms