Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VSX2P58304 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
VSX2P58304 AL161912.2-201ENST00000565707 3007 ntBASIC3.56□□□□□ -1.84
VSX2P58304 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.56□□□□□ -1.84
VSX2P58304 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
VSX2P58304 MIR200C-201ENST00000384980 68 ntBASIC3.56□□□□□ -1.84
VSX2P58304 RNA5SP424-201ENST00000390988 115 ntBASIC3.56□□□□□ -1.84
VSX2P58304 RPL21P17-201ENST00000397467 475 ntBASIC3.56□□□□□ -1.84
VSX2P58304 RPL7P60-201ENST00000397636 735 ntBASIC3.56□□□□□ -1.84
VSX2P58304 RAB9AP3-201ENST00000412737 573 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.56□□□□□ -1.84
VSX2P58304 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.56□□□□□ -1.84
VSX2P58304 AL035423.1-201ENST00000420331 213 ntBASIC3.56□□□□□ -1.84
VSX2P58304 TCEA1P2-201ENST00000420496 906 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.56□□□□□ -1.84
VSX2P58304 RAB9AP1-201ENST00000449393 573 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AC091564.1-201ENST00000464563 479 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.56□□□□□ -1.84
VSX2P58304 MTND6P6-201ENST00000478031 263 ntBASIC3.56□□□□□ -1.84
VSX2P58304 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.56□□□□□ -1.84
VSX2P58304 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.56□□□□□ -1.84
VSX2P58304 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.56□□□□□ -1.84
VSX2P58304 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.56□□□□□ -1.84
VSX2P58304 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.56□□□□□ -1.84
VSX2P58304 NDUFB4P9-201ENST00000511646 388 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.56□□□□□ -1.84
VSX2P58304 AC108120.2-201ENST00000512973 294 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AC005798.1-201ENST00000513715 387 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.56□□□□□ -1.84
VSX2P58304 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
VSX2P58304 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.56□□□□□ -1.84
VSX2P58304 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.56□□□□□ -1.84
VSX2P58304 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.56□□□□□ -1.84
VSX2P58304 CCDC58P3-201ENST00000590792 430 ntBASIC3.56□□□□□ -1.84
VSX2P58304 ABI1P1-201ENST00000603375 1120 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AL034351.1-201ENST00000605288 668 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.56□□□□□ -1.84
VSX2P58304 AP004607.9-201ENST00000618202 316 ntBASIC3.56□□□□□ -1.84
VSX2P58304 C2orf27A-204ENST00000623058 969 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AC020978.9-201ENST00000624380 1141 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AC015726.3-201ENST00000624501 418 ntBASIC3.56□□□□□ -1.84
VSX2P58304 AC112200.1-201ENST00000625015 234 ntBASIC3.56□□□□□ -1.84
VSX2P58304 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.56□□□□□ -1.84
VSX2P58304 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
VSX2P58304 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VSX2P58304 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VSX2P58304 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
VSX2P58304 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VSX2P58304 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VSX2P58304 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VSX2P58304 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VSX2P58304 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VSX2P58304 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.55□□□□□ -1.84
VSX2P58304 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.55□□□□□ -1.84
VSX2P58304 DDX6P1-205ENST00000441966 1436 ntBASIC3.55□□□□□ -1.84
VSX2P58304 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.55□□□□□ -1.84
VSX2P58304 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VSX2P58304 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VSX2P58304 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VSX2P58304 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VSX2P58304 Z86062.1-201ENST00000406773 777 ntBASIC3.55□□□□□ -1.84
VSX2P58304 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX2P58304 HIGD1AP12-201ENST00000427832 281 ntBASIC3.55□□□□□ -1.84
VSX2P58304 AC017083.1-201ENST00000428093 483 ntBASIC3.55□□□□□ -1.84
VSX2P58304 AC073069.1-201ENST00000428657 441 ntBASIC3.55□□□□□ -1.84
VSX2P58304 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.55□□□□□ -1.84
VSX2P58304 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX2P58304 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.55□□□□□ -1.84
VSX2P58304 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX2P58304 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX2P58304 AC006480.1-201ENST00000449887 378 ntBASIC3.55□□□□□ -1.84
VSX2P58304 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX2P58304 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.55□□□□□ -1.84
VSX2P58304 RN7SL93P-201ENST00000463035 293 ntBASIC3.55□□□□□ -1.84
VSX2P58304 RPL23AP12-201ENST00000467573 473 ntBASIC3.55□□□□□ -1.84
VSX2P58304 AC090543.1-201ENST00000492168 485 ntBASIC3.55□□□□□ -1.84
VSX2P58304 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
VSX2P58304 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.55□□□□□ -1.84
VSX2P58304 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX2P58304 PAICSP4-201ENST00000517543 1253 ntBASIC3.55□□□□□ -1.84
VSX2P58304 HMGB1P46-201ENST00000520062 610 ntBASIC3.55□□□□□ -1.84
VSX2P58304 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX2P58304 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX2P58304 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.55□□□□□ -1.84
VSX2P58304 AC008011.1-201ENST00000545989 227 ntBASIC3.55□□□□□ -1.84
VSX2P58304 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
VSX2P58304 AC006960.3-201ENST00000561845 705 ntBASIC3.55□□□□□ -1.84
VSX2P58304 MIR548Y-201ENST00000582739 110 ntBASIC3.55□□□□□ -1.84
VSX2P58304 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.55□□□□□ -1.84
VSX2P58304 AL355802.4-201ENST00000607635 548 ntBASIC3.55□□□□□ -1.84
VSX2P58304 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.55□□□□□ -1.84
VSX2P58304 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.55□□□□□ -1.84
VSX2P58304 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.55□□□□□ -1.84
VSX2P58304 AC011472.4-201ENST00000615848 491 ntBASIC3.55□□□□□ -1.84
VSX2P58304 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VSX2P58304 AC139769.3-201ENST00000618383 175 ntBASIC3.55□□□□□ -1.84
VSX2P58304 MIR6075-201ENST00000620782 95 ntBASIC3.55□□□□□ -1.84
VSX2P58304 AC012442.3-202ENST00000636742 206 ntBASIC3.55□□□□□ -1.84
VSX2P58304 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VSX2P58304 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms