Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.36□□□□□ -1.71
LIMK1P53667 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.36□□□□□ -1.71
LIMK1P53667 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.36□□□□□ -1.71
LIMK1P53667 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.36□□□□□ -1.71
LIMK1P53667 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.36□□□□□ -1.71
LIMK1P53667 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.36□□□□□ -1.71
LIMK1P53667 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.36□□□□□ -1.71
LIMK1P53667 AC124068.1-201ENST00000563131 678 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.36□□□□□ -1.71
LIMK1P53667 RN7SL339P-201ENST00000580597 296 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 RN7SL600P-201ENST00000581811 299 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 AL160281.1-201ENST00000605307 311 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 COX6CP4-201ENST00000605798 228 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 AC009237.17-201ENST00000618111 748 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 AC091953.5-201ENST00000622919 233 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 CR392039.5-201ENST00000623201 510 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 AC004808.1-201ENST00000627671 721 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 AC138649.5-201ENST00000637456 137 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LIMK1P53667 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
LIMK1P53667 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.36□□□□□ -1.71
LIMK1P53667 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LIMK1P53667 AP000542.2-201ENST00000623199 6179 ntBASIC4.36□□□□□ -1.71
LIMK1P53667 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LIMK1P53667 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.36□□□□□ -1.71
LIMK1P53667 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.36□□□□□ -1.71
LIMK1P53667 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LIMK1P53667 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LIMK1P53667 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LIMK1P53667 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.36□□□□□ -1.71
LIMK1P53667 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LIMK1P53667 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.35□□□□□ -1.71
LIMK1P53667 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LIMK1P53667 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LIMK1P53667 AC008033.1-201ENST00000216407 1162 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 AL080315.1-201ENST00000406055 466 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.35□□□□□ -1.71
LIMK1P53667 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.35□□□□□ -1.71
LIMK1P53667 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.35□□□□□ -1.71
LIMK1P53667 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.35□□□□□ -1.71
LIMK1P53667 PDSS1P1-201ENST00000422953 1114 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 Z74021.1-201ENST00000423610 407 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.35□□□□□ -1.71
LIMK1P53667 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LIMK1P53667 AC004938.1-201ENST00000438468 308 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 MTND1P33-201ENST00000446251 917 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.35□□□□□ -1.71
LIMK1P53667 RPL23AP43-201ENST00000446445 471 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 AC104651.2-201ENST00000447549 528 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 RPL29P29-201ENST00000448725 423 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 HMGB1P38-201ENST00000490557 577 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 RPL5P23-201ENST00000496040 868 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 AC010460.1-201ENST00000507087 466 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.35□□□□□ -1.71
LIMK1P53667 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.35□□□□□ -1.71
LIMK1P53667 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.35□□□□□ -1.71
LIMK1P53667 SERPINE4P-201ENST00000554978 281 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 NIFKP8-201ENST00000560500 874 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 OR1AB1P-201ENST00000585564 761 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.35□□□□□ -1.71
LIMK1P53667 AC113194.1-201ENST00000606037 500 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 SNORA51-201ENST00000606420 132 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.35□□□□□ -1.71
LIMK1P53667 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 AC090912.3-201ENST00000609775 533 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 AC121761.2-201ENST00000617300 689 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.35□□□□□ -1.71
LIMK1P53667 AL121594.5-201ENST00000631724 573 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.35□□□□□ -1.71
LIMK1P53667 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.35□□□□□ -1.71
LIMK1P53667 KPNA2P2-201ENST00000419546 1489 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
LIMK1P53667 AL158163.1-201ENST00000603915 1649 ntBASIC4.35□□□□□ -1.71
LIMK1P53667 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LIMK1P53667 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LIMK1P53667 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.35□□□□□ -1.71
LIMK1P53667 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.34□□□□□ -1.71
LIMK1P53667 AL136164.3-201ENST00000624429 3978 ntBASIC4.34□□□□□ -1.71
LIMK1P53667 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LIMK1P53667 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
LIMK1P53667 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LIMK1P53667 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.34□□□□□ -1.71
LIMK1P53667 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LIMK1P53667 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LIMK1P53667 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
LIMK1P53667 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LIMK1P53667 MIR331-201ENST00000362302 94 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms