Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ACLYP53396 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.06□□□□□ -1.76
ACLYP53396 HMGB3P21-201ENST00000452483 547 ntBASIC4.06□□□□□ -1.76
ACLYP53396 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.06□□□□□ -1.76
ACLYP53396 AL136126.1-201ENST00000473603 402 ntBASIC4.06□□□□□ -1.76
ACLYP53396 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ACLYP53396 RPL31P61-201ENST00000496160 376 ntBASIC4.06□□□□□ -1.76
ACLYP53396 OR52A4P-203ENST00000498233 1014 ntBASIC4.06□□□□□ -1.76
ACLYP53396 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.06□□□□□ -1.76
ACLYP53396 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.06□□□□□ -1.76
ACLYP53396 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.06□□□□□ -1.76
ACLYP53396 RNU2-27P-201ENST00000516185 142 ntBASIC4.06□□□□□ -1.76
ACLYP53396 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ACLYP53396 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.06□□□□□ -1.76
ACLYP53396 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.06□□□□□ -1.76
ACLYP53396 AC090877.1-201ENST00000561418 344 ntBASIC4.06□□□□□ -1.76
ACLYP53396 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.06□□□□□ -1.76
ACLYP53396 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.06□□□□□ -1.76
ACLYP53396 AL513477.2-201ENST00000607858 568 ntBASIC4.06□□□□□ -1.76
ACLYP53396 AC084036.1-201ENST00000609190 508 ntBASIC4.06□□□□□ -1.76
ACLYP53396 AC011472.4-201ENST00000615848 491 ntBASIC4.06□□□□□ -1.76
ACLYP53396 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.06□□□□□ -1.76
ACLYP53396 RMST_9.1-201ENST00000619945 193 ntBASIC4.06□□□□□ -1.76
ACLYP53396 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ACLYP53396 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.06□□□□□ -1.76
ACLYP53396 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ACLYP53396 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
ACLYP53396 AC017002.4-201ENST00000604721 1525 ntBASIC4.05□□□□□ -1.76
ACLYP53396 AC093311.1-201ENST00000506586 2021 ntBASIC4.05□□□□□ -1.76
ACLYP53396 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ACLYP53396 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ACLYP53396 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
ACLYP53396 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.05□□□□□ -1.76
ACLYP53396 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
ACLYP53396 OR52B1P-201ENST00000316506 909 ntBASIC4.05□□□□□ -1.76
ACLYP53396 SNORA38.1-201ENST00000364172 131 ntBASIC4.05□□□□□ -1.76
ACLYP53396 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ACLYP53396 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.05□□□□□ -1.76
ACLYP53396 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ACLYP53396 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.05□□□□□ -1.76
ACLYP53396 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.05□□□□□ -1.76
ACLYP53396 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.05□□□□□ -1.76
ACLYP53396 RNU1-103P-201ENST00000516502 125 ntBASIC4.05□□□□□ -1.76
ACLYP53396 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.05□□□□□ -1.76
ACLYP53396 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.05□□□□□ -1.76
ACLYP53396 AC008011.1-201ENST00000545989 227 ntBASIC4.05□□□□□ -1.76
ACLYP53396 MIR4298-201ENST00000584380 73 ntBASIC4.05□□□□□ -1.76
ACLYP53396 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.05□□□□□ -1.76
ACLYP53396 AC068790.5-201ENST00000602741 355 ntBASIC4.05□□□□□ -1.76
ACLYP53396 YPEL5P2-201ENST00000605553 359 ntBASIC4.05□□□□□ -1.76
ACLYP53396 MIR8057-201ENST00000620957 69 ntBASIC4.05□□□□□ -1.76
ACLYP53396 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.05□□□□□ -1.76
ACLYP53396 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.05□□□□□ -1.76
ACLYP53396 AC068254.2-201ENST00000623938 3577 ntBASIC4.05□□□□□ -1.76
ACLYP53396 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.05□□□□□ -1.76
ACLYP53396 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.05□□□□□ -1.76
ACLYP53396 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.05□□□□□ -1.76
ACLYP53396 AL118496.1-201ENST00000440201 1812 ntBASIC4.05□□□□□ -1.76
ACLYP53396 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACLYP53396 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACLYP53396 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACLYP53396 Z73965.1-201ENST00000623412 2297 ntBASIC4.04□□□□□ -1.76
ACLYP53396 RNU6-984P-201ENST00000363236 109 ntBASIC4.04□□□□□ -1.76
ACLYP53396 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACLYP53396 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.04□□□□□ -1.76
ACLYP53396 AC017083.1-201ENST00000428093 483 ntBASIC4.04□□□□□ -1.76
ACLYP53396 BX119904.1-201ENST00000432026 348 ntBASIC4.04□□□□□ -1.76
ACLYP53396 AL645931.1-201ENST00000439737 410 ntBASIC4.04□□□□□ -1.76
ACLYP53396 AC245517.2-201ENST00000442890 346 ntBASIC4.04□□□□□ -1.76
ACLYP53396 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.04□□□□□ -1.76
ACLYP53396 AP002345.1-201ENST00000456493 928 ntBASIC4.04□□□□□ -1.76
ACLYP53396 AC025518.1-201ENST00000479856 347 ntBASIC4.04□□□□□ -1.76
ACLYP53396 VWA8P1-201ENST00000510889 176 ntBASIC4.04□□□□□ -1.76
ACLYP53396 HMGB1P47-201ENST00000511281 589 ntBASIC4.04□□□□□ -1.76
ACLYP53396 HNRNPKP5-201ENST00000515300 253 ntBASIC4.04□□□□□ -1.76
ACLYP53396 RNU6-1004P-201ENST00000516584 111 ntBASIC4.04□□□□□ -1.76
ACLYP53396 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ACLYP53396 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.04□□□□□ -1.76
ACLYP53396 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ACLYP53396 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.04□□□□□ -1.76
ACLYP53396 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.04□□□□□ -1.76
ACLYP53396 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.04□□□□□ -1.76
ACLYP53396 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.04□□□□□ -1.76
ACLYP53396 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.04□□□□□ -1.76
ACLYP53396 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
ACLYP53396 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.04□□□□□ -1.76
ACLYP53396 AC123768.4-201ENST00000616244 701 ntBASIC4.04□□□□□ -1.76
ACLYP53396 AC069209.1-201ENST00000619282 651 ntBASIC4.04□□□□□ -1.76
ACLYP53396 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.04□□□□□ -1.76
ACLYP53396 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.04□□□□□ -1.76
ACLYP53396 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACLYP53396 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACLYP53396 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
ACLYP53396 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACLYP53396 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.04□□□□□ -1.76
ACLYP53396 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ACLYP53396 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
ACLYP53396 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ACLYP53396 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ACLYP53396 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms