Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.49□□□□□ -1.69
HADHAP40939 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
HADHAP40939 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HADHAP40939 ELL2P4-201ENST00000446870 1376 ntBASIC4.49□□□□□ -1.69
HADHAP40939 AC026951.1-201ENST00000559530 2459 ntBASIC4.49□□□□□ -1.69
HADHAP40939 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
HADHAP40939 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
HADHAP40939 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HADHAP40939 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HADHAP40939 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.48□□□□□ -1.69
HADHAP40939 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HADHAP40939 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
HADHAP40939 NOL8P1-201ENST00000508336 3529 ntBASIC4.48□□□□□ -1.69
HADHAP40939 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.48□□□□□ -1.69
HADHAP40939 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HADHAP40939 RNU1-15P-201ENST00000353977 144 ntBASIC4.48□□□□□ -1.69
HADHAP40939 RNU6-582P-201ENST00000362989 107 ntBASIC4.48□□□□□ -1.69
HADHAP40939 RNU6-707P-201ENST00000364647 95 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC069218.2-201ENST00000411665 344 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC004987.3-201ENST00000413879 771 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AL449283.1-202ENST00000418249 604 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.48□□□□□ -1.69
HADHAP40939 AC009237.2-201ENST00000421358 284 ntBASIC4.48□□□□□ -1.69
HADHAP40939 RPS27AP7-201ENST00000422792 455 ntBASIC4.48□□□□□ -1.69
HADHAP40939 OR4F13P-201ENST00000428478 931 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.48□□□□□ -1.69
HADHAP40939 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.48□□□□□ -1.69
HADHAP40939 GTF2IP7-202ENST00000436677 309 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC241584.1-201ENST00000438469 1241 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.48□□□□□ -1.69
HADHAP40939 RRM2P4-201ENST00000441721 562 ntBASIC4.48□□□□□ -1.69
HADHAP40939 Z77249.1-201ENST00000444622 1175 ntBASIC4.48□□□□□ -1.69
HADHAP40939 ARL2BPP10-201ENST00000446487 531 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC112492.1-201ENST00000449607 712 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.48□□□□□ -1.69
HADHAP40939 RNF138P1-201ENST00000502765 546 ntBASIC4.48□□□□□ -1.69
HADHAP40939 KLRA1P-201ENST00000503499 986 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC011352.3-201ENST00000505162 593 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC111000.3-201ENST00000508057 576 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.48□□□□□ -1.69
HADHAP40939 AC109471.1-201ENST00000511631 612 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC108043.1-201ENST00000512696 574 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.48□□□□□ -1.69
HADHAP40939 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.48□□□□□ -1.69
HADHAP40939 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.48□□□□□ -1.69
HADHAP40939 OR10V3P-201ENST00000525712 725 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.48□□□□□ -1.69
HADHAP40939 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.48□□□□□ -1.69
HADHAP40939 MIR3912-201ENST00000577566 105 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.48□□□□□ -1.69
HADHAP40939 AC021749.1-201ENST00000604322 607 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AL365400.2-201ENST00000605604 902 ntBASIC4.48□□□□□ -1.69
HADHAP40939 RNA5SP108-201ENST00000605921 117 ntBASIC4.48□□□□□ -1.69
HADHAP40939 MIR378J-201ENST00000611988 109 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC091046.2-201ENST00000620775 665 ntBASIC4.48□□□□□ -1.69
HADHAP40939 AC023510.2-201ENST00000622162 746 ntBASIC4.48□□□□□ -1.69
HADHAP40939 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.48□□□□□ -1.69
HADHAP40939 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.48□□□□□ -1.69
HADHAP40939 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.48□□□□□ -1.69
HADHAP40939 AL592148.3-201ENST00000608771 2646 ntBASIC4.48□□□□□ -1.69
HADHAP40939 OR56B2P-202ENST00000641377 2453 ntBASIC4.48□□□□□ -1.69
HADHAP40939 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HADHAP40939 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.47□□□□□ -1.69
HADHAP40939 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.47□□□□□ -1.69
HADHAP40939 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.47□□□□□ -1.69
HADHAP40939 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HADHAP40939 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HADHAP40939 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.47□□□□□ -1.69
HADHAP40939 XIAPP3-201ENST00000312918 795 ntBASIC4.47□□□□□ -1.69
HADHAP40939 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HADHAP40939 AC067945.1-201ENST00000342609 618 ntBASIC4.47□□□□□ -1.69
HADHAP40939 RNU6-1066P-201ENST00000363573 105 ntBASIC4.47□□□□□ -1.69
HADHAP40939 SNORA62-201ENST00000365493 153 ntBASIC4.47□□□□□ -1.69
HADHAP40939 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HADHAP40939 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HADHAP40939 SNORA70E-201ENST00000384492 135 ntBASIC4.47□□□□□ -1.69
HADHAP40939 RNU6-441P-201ENST00000384545 106 ntBASIC4.47□□□□□ -1.69
HADHAP40939 RNA5SP332-201ENST00000391063 115 ntBASIC4.47□□□□□ -1.69
HADHAP40939 ZNF603P-201ENST00000405613 487 ntBASIC4.47□□□□□ -1.69
HADHAP40939 RN7SKP177-201ENST00000410567 355 ntBASIC4.47□□□□□ -1.69
HADHAP40939 RN7SKP167-201ENST00000411047 285 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.47□□□□□ -1.69
HADHAP40939 AC069213.2-201ENST00000420238 366 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.47□□□□□ -1.69
HADHAP40939 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.47□□□□□ -1.69
HADHAP40939 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.47□□□□□ -1.69
HADHAP40939 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.47□□□□□ -1.69
HADHAP40939 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.47□□□□□ -1.69
HADHAP40939 EIF2S2P2-201ENST00000447161 982 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AL034418.1-201ENST00000448675 860 ntBASIC4.47□□□□□ -1.69
HADHAP40939 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HADHAP40939 PPIAP3-201ENST00000450588 505 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.47□□□□□ -1.69
HADHAP40939 NDUFA5P7-201ENST00000452914 242 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.47□□□□□ -1.69
HADHAP40939 AC087385.1-201ENST00000475062 312 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AP000926.1-201ENST00000479573 241 ntBASIC4.47□□□□□ -1.69
HADHAP40939 RPL23AP44-201ENST00000482216 473 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AC005726.1-201ENST00000494679 427 ntBASIC4.47□□□□□ -1.69
HADHAP40939 AC093720.1-201ENST00000505681 714 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms