Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RORAP35398 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
RORAP35398 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
RORAP35398 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.74□□□□□ -1.81
RORAP35398 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
RORAP35398 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
RORAP35398 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.73□□□□□ -1.81
RORAP35398 RPS4XP5-202ENST00000449995 1334 ntBASIC3.73□□□□□ -1.81
RORAP35398 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.73□□□□□ -1.81
RORAP35398 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RORAP35398 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RORAP35398 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.73□□□□□ -1.81
RORAP35398 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RORAP35398 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RORAP35398 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.73□□□□□ -1.81
RORAP35398 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.73□□□□□ -1.81
RORAP35398 RNU6-356P-201ENST00000384140 107 ntBASIC3.73□□□□□ -1.81
RORAP35398 MIR30B-201ENST00000384850 88 ntBASIC3.73□□□□□ -1.81
RORAP35398 AL590290.1-201ENST00000405336 380 ntBASIC3.73□□□□□ -1.81
RORAP35398 RPL7AP73-201ENST00000413490 353 ntBASIC3.73□□□□□ -1.81
RORAP35398 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.73□□□□□ -1.81
RORAP35398 Z97055.1-201ENST00000419730 712 ntBASIC3.73□□□□□ -1.81
RORAP35398 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.73□□□□□ -1.81
RORAP35398 HIGD1AP4-201ENST00000430194 280 ntBASIC3.73□□□□□ -1.81
RORAP35398 AC023347.2-201ENST00000433994 462 ntBASIC3.73□□□□□ -1.81
RORAP35398 RSL24D1P8-201ENST00000434442 492 ntBASIC3.73□□□□□ -1.81
RORAP35398 NOTCH2P1-201ENST00000443481 624 ntBASIC3.73□□□□□ -1.81
RORAP35398 RPL34P26-201ENST00000445636 354 ntBASIC3.73□□□□□ -1.81
RORAP35398 CEACAMP4-201ENST00000457676 421 ntBASIC3.73□□□□□ -1.81
RORAP35398 RPS3AP6-201ENST00000484430 795 ntBASIC3.73□□□□□ -1.81
RORAP35398 RPL5P23-201ENST00000496040 868 ntBASIC3.73□□□□□ -1.81
RORAP35398 AC025459.1-201ENST00000504072 156 ntBASIC3.73□□□□□ -1.81
RORAP35398 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.73□□□□□ -1.81
RORAP35398 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.73□□□□□ -1.81
RORAP35398 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.73□□□□□ -1.81
RORAP35398 NARSP2-201ENST00000518524 679 ntBASIC3.73□□□□□ -1.81
RORAP35398 AC008802.1-201ENST00000519121 791 ntBASIC3.73□□□□□ -1.81
RORAP35398 AC087369.1-201ENST00000520775 996 ntBASIC3.73□□□□□ -1.81
RORAP35398 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.73□□□□□ -1.81
RORAP35398 AP004242.1-201ENST00000533701 349 ntBASIC3.73□□□□□ -1.81
RORAP35398 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.73□□□□□ -1.81
RORAP35398 MTND4LP24-201ENST00000572277 291 ntBASIC3.73□□□□□ -1.81
RORAP35398 AC006270.2-201ENST00000578523 652 ntBASIC3.73□□□□□ -1.81
RORAP35398 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.73□□□□□ -1.81
RORAP35398 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.73□□□□□ -1.81
RORAP35398 BNIP3P33-201ENST00000598912 569 ntBASIC3.73□□□□□ -1.81
RORAP35398 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.73□□□□□ -1.81
RORAP35398 AC015726.1-201ENST00000602353 681 ntBASIC3.73□□□□□ -1.81
RORAP35398 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.73□□□□□ -1.81
RORAP35398 AC095038.2-201ENST00000621464 1070 ntBASIC3.73□□□□□ -1.81
RORAP35398 AC006065.5-201ENST00000623427 349 ntBASIC3.73□□□□□ -1.81
RORAP35398 AC012442.3-202ENST00000636742 206 ntBASIC3.73□□□□□ -1.81
RORAP35398 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RORAP35398 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.73□□□□□ -1.81
RORAP35398 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RORAP35398 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.73□□□□□ -1.81
RORAP35398 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.72□□□□□ -1.81
RORAP35398 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RORAP35398 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.72□□□□□ -1.81
RORAP35398 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RORAP35398 RNA5SP124-201ENST00000362739 110 ntBASIC3.72□□□□□ -1.81
RORAP35398 RNA5SP171-201ENST00000391071 115 ntBASIC3.72□□□□□ -1.81
RORAP35398 NPM1P10-201ENST00000398310 865 ntBASIC3.72□□□□□ -1.81
RORAP35398 Z98941.1-201ENST00000407764 100 ntBASIC3.72□□□□□ -1.81
RORAP35398 RN7SKP156-201ENST00000410308 342 ntBASIC3.72□□□□□ -1.81
RORAP35398 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.72□□□□□ -1.81
RORAP35398 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RORAP35398 AL159169.1-201ENST00000421119 127 ntBASIC3.72□□□□□ -1.81
RORAP35398 MTCO1P54-201ENST00000430139 712 ntBASIC3.72□□□□□ -1.81
RORAP35398 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.72□□□□□ -1.81
RORAP35398 NANOGP10-201ENST00000453325 895 ntBASIC3.72□□□□□ -1.81
RORAP35398 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.72□□□□□ -1.81
RORAP35398 TPRKBP1-201ENST00000456243 481 ntBASIC3.72□□□□□ -1.81
RORAP35398 RPL37P3-201ENST00000456825 293 ntBASIC3.72□□□□□ -1.81
RORAP35398 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.72□□□□□ -1.81
RORAP35398 AC023141.12-201ENST00000512399 199 ntBASIC3.72□□□□□ -1.81
RORAP35398 AC026616.1-201ENST00000523157 525 ntBASIC3.72□□□□□ -1.81
RORAP35398 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RORAP35398 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RORAP35398 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.72□□□□□ -1.81
RORAP35398 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.72□□□□□ -1.81
RORAP35398 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.72□□□□□ -1.81
RORAP35398 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.72□□□□□ -1.81
RORAP35398 AC103710.3-201ENST00000608157 948 ntBASIC3.72□□□□□ -1.81
RORAP35398 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.72□□□□□ -1.81
RORAP35398 AC112503.1-201ENST00000608436 391 ntBASIC3.72□□□□□ -1.81
RORAP35398 AP000255.1-201ENST00000610276 676 ntBASIC3.72□□□□□ -1.81
RORAP35398 AL121772.2-201ENST00000614331 297 ntBASIC3.72□□□□□ -1.81
RORAP35398 AL162233.1-201ENST00000620014 944 ntBASIC3.72□□□□□ -1.81
RORAP35398 CR392039.5-201ENST00000623201 510 ntBASIC3.72□□□□□ -1.81
RORAP35398 AC124312.6-202ENST00000623624 418 ntBASIC3.72□□□□□ -1.81
RORAP35398 AL773545.4-201ENST00000637262 310 ntBASIC3.72□□□□□ -1.81
RORAP35398 AL513478.4-201ENST00000641636 310 ntBASIC3.72□□□□□ -1.81
RORAP35398 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RORAP35398 AP002001.2-201ENST00000529025 1469 ntBASIC3.72□□□□□ -1.81
RORAP35398 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RORAP35398 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RORAP35398 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.71□□□□□ -1.81
RORAP35398 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
RORAP35398 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms