Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.53□□□□□ -1.52
SNRPA1P09661 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.53□□□□□ -1.52
SNRPA1P09661 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.53□□□□□ -1.52
SNRPA1P09661 AC125494.3-201ENST00000602759 455 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 AC010738.1-201ENST00000604970 987 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 AL353600.1-201ENST00000608148 251 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 MIR6867-201ENST00000610636 67 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 AL122125.1-201ENST00000616999 600 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.53□□□□□ -1.52
SNRPA1P09661 STMN1P1-201ENST00000617809 440 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 AC024595.1-201ENST00000623088 387 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 AC112484.5-201ENST00000624189 228 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNRPA1P09661 AF001550.2-201ENST00000636643 217 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 MFSD8-245ENST00000641743 948 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SNRPA1P09661 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SNRPA1P09661 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.52□□□□□ -1.53
SNRPA1P09661 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 AL672167.1-205ENST00000641112 3080 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SNRPA1P09661 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.52□□□□□ -1.53
SNRPA1P09661 MIR372-201ENST00000362225 67 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 Y_RNA.77-201ENST00000362962 107 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.52□□□□□ -1.53
SNRPA1P09661 RPS3AP26-201ENST00000398259 784 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 GSTA8P-201ENST00000404253 637 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.52□□□□□ -1.53
SNRPA1P09661 RN7SKP33-201ENST00000410942 340 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 AC105402.1-201ENST00000413336 545 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 TCEA1P4-201ENST00000415066 844 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 AC098592.1-201ENST00000419352 333 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.52□□□□□ -1.53
SNRPA1P09661 AL158073.1-201ENST00000426848 1104 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 RPL23AP4-201ENST00000427757 463 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 COX6B1P7-201ENST00000430845 235 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 YWHAZP7-201ENST00000436906 631 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 MTCYBP34-201ENST00000439552 670 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 RPL23AP76-201ENST00000441860 458 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 AL360221.1-201ENST00000445989 335 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 AL929288.2-201ENST00000446368 407 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.52□□□□□ -1.53
SNRPA1P09661 AC097262.1-201ENST00000452559 548 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 SNRPCP3-201ENST00000474888 476 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.52□□□□□ -1.53
SNRPA1P09661 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 AC104108.1-201ENST00000509930 412 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 AC093755.1-201ENST00000512950 1023 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.52□□□□□ -1.53
SNRPA1P09661 RPL12P22-201ENST00000519073 490 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.52□□□□□ -1.53
SNRPA1P09661 AC092747.2-201ENST00000545069 983 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.52□□□□□ -1.53
SNRPA1P09661 AL352979.3-201ENST00000553515 247 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 RPL23AP97-201ENST00000568955 471 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 AP001981.2-201ENST00000603241 418 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 RNF138P2-201ENST00000603490 592 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 DUXAP11-201ENST00000603858 526 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 Z98200.1-201ENST00000607298 470 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.52□□□□□ -1.53
SNRPA1P09661 AC007494.3-201ENST00000624660 743 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 U6.107-201ENST00000637108 79 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 SAMMSON-213ENST00000641336 1521 ntBASIC5.52□□□□□ -1.53
SNRPA1P09661 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNRPA1P09661 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SNRPA1P09661 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNRPA1P09661 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.51□□□□□ -1.53
SNRPA1P09661 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.51□□□□□ -1.53
SNRPA1P09661 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNRPA1P09661 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.51□□□□□ -1.53
SNRPA1P09661 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNRPA1P09661 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.51□□□□□ -1.53
SNRPA1P09661 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.51□□□□□ -1.53
SNRPA1P09661 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SNRPA1P09661 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SNRPA1P09661 RNU1-64P-201ENST00000365443 163 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 RNU6-185P-201ENST00000384421 107 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AC093719.1-202ENST00000392735 373 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AL078595.1-201ENST00000404458 226 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 CTSL3P-202ENST00000412179 788 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 OR8G2P-201ENST00000412796 908 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 EIF1P3-201ENST00000423841 334 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AC098826.1-201ENST00000433943 471 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 MTND3P1-201ENST00000441336 220 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 CDC27P1-201ENST00000445384 715 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AL031584.1-201ENST00000447169 754 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.51□□□□□ -1.53
SNRPA1P09661 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.51□□□□□ -1.53
SNRPA1P09661 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms