Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.7□□□□□ -1.98
CXCL1P09341 AC022034.3-201ENST00000471393 478 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 RPL32P9-201ENST00000487963 407 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 AC078918.1-201ENST00000498515 228 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL1P09341 SNORA70.19-201ENST00000516717 90 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 SCARNA20.6-201ENST00000517251 106 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL1P09341 OR7E13P-201ENST00000526052 910 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL1P09341 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.7□□□□□ -1.98
CXCL1P09341 MAGOH2P-202ENST00000584384 429 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 AC006065.5-201ENST00000623427 349 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 RPL23AP61-201ENST00000623642 466 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 AC090506.2-201ENST00000624521 419 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.7□□□□□ -1.98
CXCL1P09341 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CXCL1P09341 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.7□□□□□ -1.98
CXCL1P09341 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.7□□□□□ -1.98
CXCL1P09341 AC118273.1-201ENST00000525324 3006 ntBASIC2.7□□□□□ -1.98
CXCL1P09341 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.7□□□□□ -1.98
CXCL1P09341 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.7□□□□□ -1.98
CXCL1P09341 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CXCL1P09341 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
CXCL1P09341 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CXCL1P09341 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.69□□□□□ -1.98
CXCL1P09341 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CXCL1P09341 AC117529.2-201ENST00000512159 2068 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CXCL1P09341 RNA5SP130-201ENST00000364431 114 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 RNU6-167P-201ENST00000384292 106 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 RNU6-532P-201ENST00000384318 107 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 AL592293.2-201ENST00000422292 996 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.69□□□□□ -1.98
CXCL1P09341 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.69□□□□□ -1.98
CXCL1P09341 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL1P09341 SETP5-201ENST00000437270 562 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL1P09341 HMGB3P11-201ENST00000440127 604 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 OR6C72P-201ENST00000451403 892 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL1P09341 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CXCL1P09341 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL1P09341 RPL35AP28-201ENST00000459730 331 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 AC091179.1-201ENST00000461606 579 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 MTATP6P22-201ENST00000507369 598 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CXCL1P09341 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL1P09341 RN7SL753P-201ENST00000581238 290 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL1P09341 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC2.69□□□□□ -1.98
CXCL1P09341 SNORA51-201ENST00000606420 132 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.69□□□□□ -1.98
CXCL1P09341 AL445567.2-201ENST00000618935 498 ntBASIC2.69□□□□□ -1.98
CXCL1P09341 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CXCL1P09341 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CXCL1P09341 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CXCL1P09341 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.68□□□□□ -1.98
CXCL1P09341 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CXCL1P09341 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CXCL1P09341 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CXCL1P09341 OR4A15-201ENST00000314706 1035 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.68□□□□□ -1.98
CXCL1P09341 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.68□□□□□ -1.98
CXCL1P09341 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CXCL1P09341 SNORD65-201ENST00000391079 73 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 OR6C69P-201ENST00000394268 893 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 AL356968.1-201ENST00000416622 474 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 RCC2P2-201ENST00000422174 918 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 SDCBPP2-201ENST00000424643 885 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 AL353705.1-201ENST00000433468 480 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL1P09341 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL1P09341 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL1P09341 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL1P09341 AC007967.1-201ENST00000455422 1159 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 NDUFA12P1-201ENST00000455914 406 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 RNU7-27P-201ENST00000459281 62 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.68□□□□□ -1.98
CXCL1P09341 AC023598.1-201ENST00000472521 361 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL1P09341 RPL30P11-201ENST00000495304 339 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 SETP14-201ENST00000497538 873 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 AC231760.1-201ENST00000498002 260 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 FTH1P24-201ENST00000503502 462 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL1P09341 AC107934.2-201ENST00000518653 310 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL1P09341 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CXCL1P09341 AC009643.1-201ENST00000532030 391 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CXCL1P09341 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL1P09341 OR4T1P-201ENST00000554933 911 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.68□□□□□ -1.98
CXCL1P09341 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL1P09341 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC2.68□□□□□ -1.98
CXCL1P09341 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.68□□□□□ -1.98
CXCL1P09341 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.68□□□□□ -1.98
CXCL1P09341 AC006077.1-201ENST00000604746 343 ntBASIC2.68□□□□□ -1.98
CXCL1P09341 AL391834.1-201ENST00000609609 560 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms