Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Gm10013-201ENSMUST00000106074 672 ntBASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5538W4VSP6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5538W4VSP6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Gm5538W4VSP6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Gm11355-201ENSMUST00000121120 306 ntBASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Gm29707-201ENSMUST00000196325 491 ntBASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.83■□□□□ 0.28
Gm5538W4VSP6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5538W4VSP6 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5538W4VSP6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Gm6345-202ENSMUST00000180900 204 ntBASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5538W4VSP6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms