Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Gm7213-201ENSMUST00000215977 950 ntBASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ClcnkaQ9WUB7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
ClcnkaQ9WUB7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Gm9987-201ENSMUST00000069768 567 ntBASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ClcnkaQ9WUB7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms