Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.32■□□□□ 0.04
Htra1Q9R118 Gm18025-201ENSMUST00000221733 862 ntBASIC15.32■□□□□ 0.04
Htra1Q9R118 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Htra1Q9R118 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Htra1Q9R118 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Htra1Q9R118 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Htra1Q9R118 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Htra1Q9R118 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Htra1Q9R118 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Htra1Q9R118 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Htra1Q9R118 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Htra1Q9R118 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Htra1Q9R118 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Htra1Q9R118 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Htra1Q9R118 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.31■□□□□ 0.04
Htra1Q9R118 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Gm5643-201ENSMUST00000117081 966 ntBASIC15.31■□□□□ 0.04
Htra1Q9R118 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.31■□□□□ 0.04
Htra1Q9R118 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.31■□□□□ 0.04
Htra1Q9R118 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.31■□□□□ 0.04
Htra1Q9R118 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Htra1Q9R118 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.31■□□□□ 0.04
Htra1Q9R118 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.31■□□□□ 0.04
Htra1Q9R118 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.31■□□□□ 0.04
Htra1Q9R118 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Htra1Q9R118 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.31■□□□□ 0.04
Htra1Q9R118 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.3■□□□□ 0.04
Htra1Q9R118 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.3■□□□□ 0.04
Htra1Q9R118 Gm13401-201ENSMUST00000117074 291 ntBASIC15.3■□□□□ 0.04
Htra1Q9R118 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.3■□□□□ 0.04
Htra1Q9R118 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Htra1Q9R118 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Htra1Q9R118 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Htra1Q9R118 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.29■□□□□ 0.04
Htra1Q9R118 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Htra1Q9R118 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Htra1Q9R118 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.29■□□□□ 0.04
Htra1Q9R118 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.29■□□□□ 0.04
Htra1Q9R118 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.29■□□□□ 0.04
Htra1Q9R118 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.29■□□□□ 0.04
Htra1Q9R118 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Htra1Q9R118 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Htra1Q9R118 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Htra1Q9R118 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.28■□□□□ 0.04
Htra1Q9R118 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.28■□□□□ 0.04
Htra1Q9R118 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Htra1Q9R118 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms