Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Gm7791-201ENSMUST00000219066 539 ntBASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rbfox1Q9JJ43 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Mir1199-201ENSMUST00000117015 119 ntBASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Gm15039-201ENSMUST00000118914 875 ntBASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rbfox1Q9JJ43 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rbfox1Q9JJ43 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms