Protein–RNA interactions for Protein: Q9ER62

Tnfrsf22, Tumor necrosis factor receptor superfamily member 22, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf22Q9ER62 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf22Q9ER62 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf22Q9ER62 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf22Q9ER62 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf22Q9ER62 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf22Q9ER62 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.43■□□□□ 0.06
Tnfrsf22Q9ER62 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf22Q9ER62 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf22Q9ER62 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Tnfrsf22Q9ER62 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf22Q9ER62 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Gm7461-201ENSMUST00000058918 827 ntBASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf22Q9ER62 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf22Q9ER62 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf22Q9ER62 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms