Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Nkx2-4Q9EQM3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.89■□□□□ 0.29
Nkx2-4Q9EQM3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx2-4Q9EQM3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Gm44872-201ENSMUST00000207864 420 ntBASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx2-4Q9EQM3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Gm11025-201ENSMUST00000140773 466 ntBASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx2-4Q9EQM3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx2-4Q9EQM3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms