Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp4cQ9D7F7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Gm3375-201ENSMUST00000203929 796 ntBASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp4cQ9D7F7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp4cQ9D7F7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Mir5122-201ENSMUST00000175004 89 ntBASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp4cQ9D7F7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp4cQ9D7F7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Il3ra-202ENSMUST00000223589 738 ntBASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp4cQ9D7F7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms