Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3404Q9D506 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm3404Q9D506 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3404Q9D506 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3404Q9D506 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3404Q9D506 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3404Q9D506 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3404Q9D506 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Gm3404Q9D506 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Gm3404Q9D506 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3404Q9D506 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3404Q9D506 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.52■□□□□ 0.4
Gm3404Q9D506 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Gm3404Q9D506 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Gm3404Q9D506 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm3404Q9D506 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm3404Q9D506 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Gm9013-201ENSMUST00000132939 882 ntBASIC17.51■□□□□ 0.39
Gm3404Q9D506 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3404Q9D506 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.5■□□□□ 0.39
Gm3404Q9D506 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Gm44450-201ENSMUST00000199528 114 ntBASIC17.5■□□□□ 0.39
Gm3404Q9D506 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Gm18421-201ENSMUST00000204122 625 ntBASIC17.5■□□□□ 0.39
Gm3404Q9D506 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm3404Q9D506 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm3404Q9D506 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm3404Q9D506 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3404Q9D506 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3404Q9D506 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3404Q9D506 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3404Q9D506 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3404Q9D506 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3404Q9D506 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3404Q9D506 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms