Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Gm18733-201ENSMUST00000173950 856 ntBASIC19.6■□□□□ 0.73
Stag1Q9D3E6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Stag1Q9D3E6 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Gm6296-201ENSMUST00000222599 943 ntBASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Stag1Q9D3E6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stag1Q9D3E6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.58■□□□□ 0.72
Stag1Q9D3E6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.58■□□□□ 0.72
Stag1Q9D3E6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.58■□□□□ 0.72
Stag1Q9D3E6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stag1Q9D3E6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stag1Q9D3E6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stag1Q9D3E6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Stag1Q9D3E6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Stag1Q9D3E6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stag1Q9D3E6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Stag1Q9D3E6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Gm6376-201ENSMUST00000209407 580 ntBASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.57■□□□□ 0.72
Stag1Q9D3E6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.56■□□□□ 0.72
Stag1Q9D3E6 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Stag1Q9D3E6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Stag1Q9D3E6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms