Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.48■□□□□ 0.23
Snrnp48Q9D361 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Snrnp48Q9D361 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Snrnp48Q9D361 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.46■□□□□ 0.23
Snrnp48Q9D361 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Snrnp48Q9D361 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Gm37722-201ENSMUST00000193757 208 ntBASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Snrnp48Q9D361 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Mir7071-201ENSMUST00000184847 69 ntBASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Snrnp48Q9D361 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms