Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Gm26524-201ENSMUST00000192339 390 ntBASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim42Q9D2H5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim42Q9D2H5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim42Q9D2H5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim42Q9D2H5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim42Q9D2H5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trim42Q9D2H5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Trim42Q9D2H5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trim42Q9D2H5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trim42Q9D2H5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.52■□□□□ 0.23
Trim42Q9D2H5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim42Q9D2H5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim42Q9D2H5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim42Q9D2H5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim42Q9D2H5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms