Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.81■□□□□ 0.6
Trim11Q99PQ2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim11Q99PQ2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim11Q99PQ2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim11Q99PQ2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.78■□□□□ 0.6
Trim11Q99PQ2 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim11Q99PQ2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Gm13559-201ENSMUST00000120476 863 ntBASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Gm7213-201ENSMUST00000215977 950 ntBASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim11Q99PQ2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim11Q99PQ2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim11Q99PQ2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim11Q99PQ2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim11Q99PQ2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.76■□□□□ 0.59
Trim11Q99PQ2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms