Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col25a1Q99MQ5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Col25a1Q99MQ5 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Gm10355-201ENSMUST00000097146 517 ntBASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col25a1Q99MQ5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Gm11336-201ENSMUST00000118168 334 ntBASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col25a1Q99MQ5 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Col25a1Q99MQ5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms