Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Gm6089-201ENSMUST00000197666 938 ntBASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx6-1Q99MA9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx6-1Q99MA9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Gm14140-201ENSMUST00000119999 995 ntBASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx6-1Q99MA9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 AV026068-213ENSMUST00000223675 1171 ntBASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
Nkx6-1Q99MA9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Gm9727-201ENSMUST00000161387 555 ntBASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Gm6550-201ENSMUST00000187574 993 ntBASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.41■□□□□ 0.06
Nkx6-1Q99MA9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms