Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcc1Q99LI2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Gm13216-201ENSMUST00000117145 591 ntBASIC16.28■□□□□ 0.2
Clcc1Q99LI2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcc1Q99LI2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcc1Q99LI2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clcc1Q99LI2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcc1Q99LI2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcc1Q99LI2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcc1Q99LI2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcc1Q99LI2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcc1Q99LI2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.27■□□□□ 0.2
Clcc1Q99LI2 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.27■□□□□ 0.2
Clcc1Q99LI2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clcc1Q99LI2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clcc1Q99LI2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcc1Q99LI2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clcc1Q99LI2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.27■□□□□ 0.19
Clcc1Q99LI2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcc1Q99LI2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.27■□□□□ 0.19
Clcc1Q99LI2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Clcc1Q99LI2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcc1Q99LI2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcc1Q99LI2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcc1Q99LI2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Gm29707-201ENSMUST00000196325 491 ntBASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcc1Q99LI2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clcc1Q99LI2 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.24■□□□□ 0.19
Clcc1Q99LI2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcc1Q99LI2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clcc1Q99LI2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms