Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd3Q99LE3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd3Q99LE3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd3Q99LE3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd3Q99LE3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd3Q99LE3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Gm28033-201ENSMUST00000184224 96 ntBASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd3Q99LE3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd3Q99LE3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lysmd3Q99LE3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lysmd3Q99LE3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lysmd3Q99LE3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lysmd3Q99LE3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Lysmd3Q99LE3 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.08■□□□□ 0.33
Lysmd3Q99LE3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Lysmd3Q99LE3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.08■□□□□ 0.32
Lysmd3Q99LE3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd3Q99LE3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Lysmd3Q99LE3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.08■□□□□ 0.32
Lysmd3Q99LE3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Lysmd3Q99LE3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Lysmd3Q99LE3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lysmd3Q99LE3 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.08■□□□□ 0.32
Lysmd3Q99LE3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Lysmd3Q99LE3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Lysmd3Q99LE3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd3Q99LE3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd3Q99LE3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd3Q99LE3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd3Q99LE3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Lysmd3Q99LE3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Lysmd3Q99LE3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd3Q99LE3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd3Q99LE3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd3Q99LE3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lysmd3Q99LE3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms