Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Gm10418-201ENSMUST00000100943 576 ntBASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Gm15378-201ENSMUST00000121894 207 ntBASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Gm10698-201ENSMUST00000182663 604 ntBASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhb3Q91XZ7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb3Q91XZ7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb3Q91XZ7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Prob1-201ENSMUST00000097619 3021 ntBASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhb3Q91XZ7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhb3Q91XZ7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms