Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Gm13559-201ENSMUST00000120476 863 ntBASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb8Q91XZ2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Gm13474-201ENSMUST00000122466 815 ntBASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Phf7-203ENSMUST00000226565 1971 ntBASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb8Q91XZ2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb8Q91XZ2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Actl10-202ENSMUST00000226583 1501 ntBASIC16.09■□□□□ 0.17
Pcdhb8Q91XZ2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb8Q91XZ2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb8Q91XZ2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb8Q91XZ2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb8Q91XZ2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Pcdhb8Q91XZ2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb8Q91XZ2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb8Q91XZ2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb8Q91XZ2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms