Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trex1Q91XB0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.87■□□□□ 0.61
Trex1Q91XB0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Gm18206-201ENSMUST00000207027 926 ntBASIC18.87■□□□□ 0.61
Trex1Q91XB0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trex1Q91XB0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Gm10060-201ENSMUST00000212002 111 ntBASIC18.86■□□□□ 0.61
Trex1Q91XB0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.86■□□□□ 0.61
Trex1Q91XB0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trex1Q91XB0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.85■□□□□ 0.61
Trex1Q91XB0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.85■□□□□ 0.61
Trex1Q91XB0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trex1Q91XB0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trex1Q91XB0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trex1Q91XB0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trex1Q91XB0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trex1Q91XB0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trex1Q91XB0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.83■□□□□ 0.61
Trex1Q91XB0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trex1Q91XB0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.83■□□□□ 0.61
Trex1Q91XB0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trex1Q91XB0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trex1Q91XB0 Gm36967-201ENSMUST00000193814 266 ntBASIC18.83■□□□□ 0.6
Trex1Q91XB0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.83■□□□□ 0.6
Trex1Q91XB0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trex1Q91XB0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trex1Q91XB0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trex1Q91XB0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trex1Q91XB0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trex1Q91XB0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trex1Q91XB0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trex1Q91XB0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trex1Q91XB0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms