Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
H1fooQ8VIK3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
H1fooQ8VIK3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.83□□□□□ -0.2
H1fooQ8VIK3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
H1fooQ8VIK3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
H1fooQ8VIK3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H1fooQ8VIK3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
H1fooQ8VIK3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms