Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TraipQ8VIG6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Gm5864-201ENSMUST00000202263 970 ntBASIC17.51■□□□□ 0.39
TraipQ8VIG6 Gm44487-201ENSMUST00000205145 325 ntBASIC17.51■□□□□ 0.39
TraipQ8VIG6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TraipQ8VIG6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TraipQ8VIG6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TraipQ8VIG6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TraipQ8VIG6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Gm18195-201ENSMUST00000207604 706 ntBASIC17.49■□□□□ 0.39
TraipQ8VIG6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TraipQ8VIG6 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.49■□□□□ 0.39
TraipQ8VIG6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.49■□□□□ 0.39
TraipQ8VIG6 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.49■□□□□ 0.39
TraipQ8VIG6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TraipQ8VIG6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TraipQ8VIG6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TraipQ8VIG6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TraipQ8VIG6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TraipQ8VIG6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TraipQ8VIG6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TraipQ8VIG6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TraipQ8VIG6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TraipQ8VIG6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.48■□□□□ 0.39
TraipQ8VIG6 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.48■□□□□ 0.39
TraipQ8VIG6 Gm27867-201ENSMUST00000184778 125 ntBASIC17.48■□□□□ 0.39
TraipQ8VIG6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TraipQ8VIG6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TraipQ8VIG6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TraipQ8VIG6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TraipQ8VIG6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.47■□□□□ 0.39
TraipQ8VIG6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TraipQ8VIG6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TraipQ8VIG6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Gm44771-201ENSMUST00000206975 626 ntBASIC17.46■□□□□ 0.39
TraipQ8VIG6 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.46■□□□□ 0.39
TraipQ8VIG6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TraipQ8VIG6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms