Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 AV026068-213ENSMUST00000223675 1171 ntBASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Gm13616-201ENSMUST00000120600 222 ntBASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg4Q8VHY0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Gm13418-201ENSMUST00000119097 944 ntBASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg4Q8VHY0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Gm15590-201ENSMUST00000078419 552 ntBASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cspg4Q8VHY0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cspg4Q8VHY0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms