Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rab40cQ8VHQ4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Gm10602-201ENSMUST00000098239 609 ntBASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rab40cQ8VHQ4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Gm2559-201ENSMUST00000201323 363 ntBASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rab40cQ8VHQ4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rab40cQ8VHQ4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms