Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Gm44430-201ENSMUST00000203376 995 ntBASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ddx39aQ8VDW0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Gm12644-201ENSMUST00000119935 606 ntBASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ddx39aQ8VDW0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Gm13312-201ENSMUST00000119631 718 ntBASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx39aQ8VDW0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Gm13884-201ENSMUST00000118103 829 ntBASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Gm11452-201ENSMUST00000122376 690 ntBASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Mir8098-201ENSMUST00000184011 137 ntBASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Gm27867-201ENSMUST00000184778 125 ntBASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ddx39aQ8VDW0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Gm15372-201ENSMUST00000120729 834 ntBASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Rprl3-201ENSMUST00000157400 290 ntBASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx39aQ8VDW0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx39aQ8VDW0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx39aQ8VDW0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Ddx39aQ8VDW0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx39aQ8VDW0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms