Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3kbp1Q8R550 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sh3kbp1Q8R550 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh3kbp1Q8R550 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3kbp1Q8R550 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Gm18669-201ENSMUST00000216049 778 ntBASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17■□□□□ 0.31
Sh3kbp1Q8R550 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Sh3kbp1Q8R550 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sh3kbp1Q8R550 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3kbp1Q8R550 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3kbp1Q8R550 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Mir3081-201ENSMUST00000175305 84 ntBASIC16.96■□□□□ 0.31
Sh3kbp1Q8R550 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms