Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chrna3Q8R4G9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chrna3Q8R4G9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Chrna3Q8R4G9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chrna3Q8R4G9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Chrna3Q8R4G9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Chrna3Q8R4G9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chrna3Q8R4G9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chrna3Q8R4G9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Gm27742-201ENSMUST00000184667 60 ntBASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Ank2-226ENSMUST00000189368 339 ntBASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.18■□□□□ 0.18
Chrna3Q8R4G9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.17■□□□□ 0.18
Chrna3Q8R4G9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.16■□□□□ 0.18
Chrna3Q8R4G9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms