Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Gm44430-201ENSMUST00000203376 995 ntBASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp40Q8R1F9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Gm9103-201ENSMUST00000119371 405 ntBASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp40Q8R1F9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.64■□□□□ 0.42
Rpp40Q8R1F9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp40Q8R1F9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp40Q8R1F9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rpp40Q8R1F9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms