Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Gm44878-201ENSMUST00000205812 1295 ntBASIC10.4□□□□□ -0.74
Cystm1Q8K353 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Gm44672-201ENSMUST00000206944 1098 ntBASIC10.4□□□□□ -0.74
Cystm1Q8K353 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cystm1Q8K353 AC125311.2-201ENSMUST00000227477 1940 ntBASIC10.4□□□□□ -0.74
Cystm1Q8K353 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Cystm1Q8K353 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC10.4□□□□□ -0.74
Cystm1Q8K353 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cystm1Q8K353 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cystm1Q8K353 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Cystm1Q8K353 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Gm44549-201ENSMUST00000208351 577 ntBASIC10.39□□□□□ -0.75
Cystm1Q8K353 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Cystm1Q8K353 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Gm16425-201ENSMUST00000118143 3130 ntBASIC10.38□□□□□ -0.75
Cystm1Q8K353 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC10.38□□□□□ -0.75
Cystm1Q8K353 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC10.38□□□□□ -0.75
Cystm1Q8K353 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Cystm1Q8K353 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Cystm1Q8K353 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms