Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox30Q8CGW4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Gm11539-201ENSMUST00000119837 557 ntBASIC18.05■□□□□ 0.48
Sox30Q8CGW4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox30Q8CGW4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox30Q8CGW4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox30Q8CGW4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Sox30Q8CGW4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox30Q8CGW4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms