Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Gm11025-201ENSMUST00000140773 466 ntBASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Gm44335-201ENSMUST00000196879 141 ntBASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Gm44492-201ENSMUST00000197012 141 ntBASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Gm44297-201ENSMUST00000198304 141 ntBASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Gm44346-201ENSMUST00000198851 141 ntBASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rp1l1Q8CGM2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Gm4899-201ENSMUST00000178708 719 ntBASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rp1l1Q8CGM2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Gm45167-201ENSMUST00000208007 322 ntBASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rp1l1Q8CGM2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Gm37153-201ENSMUST00000193637 231 ntBASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rp1l1Q8CGM2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms