Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.49■□□□□ 0.71
Rbm28Q8CGC6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbm28Q8CGC6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Rbm28Q8CGC6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbm28Q8CGC6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbm28Q8CGC6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.49■□□□□ 0.71
Rbm28Q8CGC6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rbm28Q8CGC6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbm28Q8CGC6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbm28Q8CGC6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.49■□□□□ 0.71
Rbm28Q8CGC6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbm28Q8CGC6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rbm28Q8CGC6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Gm44450-201ENSMUST00000199528 114 ntBASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbm28Q8CGC6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbm28Q8CGC6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbm28Q8CGC6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Gm29707-201ENSMUST00000196325 491 ntBASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Gm7461-201ENSMUST00000058918 827 ntBASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbm28Q8CGC6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbm28Q8CGC6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms