Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb7Q8CDY9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb7Q8CDY9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb7Q8CDY9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhb7Q8CDY9 Gm2274-201ENSMUST00000184539 609 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms